| WebGestalt 2019: gene set analysis toolkit with revamped UIs and APIs Y Liao, J Wang, EJ Jaehnig, Z Shi, B Zhang Nucleic acids research 47 (W1), W199-W205, 2019 | 2670 | 2019 |
| Rewiring of genetic networks in response to DNA damage S Bandyopadhyay, M Mehta, D Kuo, MK Sung, R Chuang, EJ Jaehnig, ... Science 330 (6009), 1385-1389, 2010 | 545 | 2010 |
| Proteogenomic and metabolomic characterization of human glioblastoma LB Wang, A Karpova, MA Gritsenko, JE Kyle, S Cao, Y Li, D Rykunov, ... Cancer cell 39 (4), 509-528. e20, 2021 | 440 | 2021 |
| Proteogenomic characterization of endometrial carcinoma Y Dou, EA Kawaler, DC Zhou, MA Gritsenko, C Huang, L Blumenberg, ... Cell 180 (4), 729-748. e26, 2020 | 359 | 2020 |
| Proteogenomic landscape of breast cancer tumorigenesis and targeted therapy K Krug, EJ Jaehnig, S Satpathy, L Blumenberg, A Karpova, M Anurag, ... Cell 183 (5), 1436-1456. e31, 2020 | 350 | 2020 |
| Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma C Huang, L Chen, SR Savage, RV Eguez, Y Dou, Y Li, ... Cancer cell 39 (3), 361-379. e16, 2021 | 241 | 2021 |
| A proteogenomic portrait of lung squamous cell carcinoma S Satpathy, K Krug, PMJ Beltran, SR Savage, F Petralia, C Kumar-Sinha, ... Cell 184 (16), 4348-4371. e40, 2021 | 223 | 2021 |
| Microscaled proteogenomic methods for precision oncology S Satpathy, EJ Jaehnig, K Krug, BJ Kim, AB Saltzman, DW Chan, ... Nature communications 11 (1), 532, 2020 | 104 | 2020 |
| Checkpoint kinases regulate a global network of transcription factors in response to DNA damage EJ Jaehnig, D Kuo, H Hombauer, TG Ideker, RD Kolodner Cell reports 4 (1), 174-188, 2013 | 83 | 2013 |
| HRC is a direct transcriptional target of MEF2 during cardiac, skeletal, and arterial smooth muscle development in vivo JP Anderson, E Dodou, AB Heidt, SJ De Val, EJ Jaehnig, SB Greene, ... Molecular and cellular biology, 2004 | 78 | 2004 |
| Perspectives on the DNA damage and replication checkpoint responses in Saccharomyces cerevisiae CD Putnam, EJ Jaehnig, RD Kolodner DNA repair 8 (9), 974-982, 2009 | 68 | 2009 |
| MEF2C regulates outflow tract alignment and transcriptional control of Tdgf1 RM Barnes, IS Harris, EJ Jaehnig, K Sauls, T Sinha, A Rojas, ... Development 143 (5), 774-779, 2016 | 59 | 2016 |
| Proteogenomic data and resources for pan-cancer analysis Y Li, Y Dou, FDV Leprevost, Y Geffen, AP Calinawan, F Aguet, Y Akiyama, ... Cancer cell 41 (8), 1397-1406, 2023 | 47 | 2023 |
| Proteogenomic markers of chemotherapy resistance and response in triple-negative breast cancer M Anurag, EJ Jaehnig, K Krug, JT Lei, EJ Bergstrom, BJ Kim, TD Vashist, ... Cancer discovery 12 (11), 2586-2605, 2022 | 46 | 2022 |
| Cell-autonomous activation of Hedgehog signaling inhibits brown adipose tissue development LG Nosavanh, DH Yu, EJ Jaehnig, Q Tong, L Shen, MH Chen Proceedings of the National Academy of Sciences 112 (16), 5069-5074, 2015 | 42 | 2015 |
| Identification and characterization of a supraclavicular brown adipose tissue in mice Q Mo, J Salley, T Roshan, LA Baer, FJ May, EJ Jaehnig, AC Lehnig, ... JCI insight 2 (11), 2017 | 38 | 2017 |
| Increased susceptibility to isoproterenol-induced cardiac hypertrophy and impaired weight gain in mice lacking the histidine-rich calcium-binding protein EJ Jaehnig, AB Heidt, SB Greene, I Cornelissen, BL Black Molecular and cellular biology 26 (24), 9315-9326, 2006 | 33 | 2006 |
| Pan-cancer analysis of post-translational modifications reveals shared patterns of protein regulation Y Geffen, S Anand, Y Akiyama, TM Yaron, Y Song, JL Johnson, ... Cell 186 (18), 3945-3967. e26, 2023 | 32 | 2023 |
| Pan-cancer proteogenomics connects oncogenic drivers to functional states Y Li, E Porta-Pardo, C Tokheim, MH Bailey, TM Yaron, V Stathias, ... Cell 186 (18), 3921-3944. e25, 2023 | 31 | 2023 |
| Multiple determinants contribute to the virulence of HSV ocular and CNS infection and identification of serine 34 of the US1 gene as an ocular disease determinant CR Brandt, AW Kolb, DD Shah, AM Pumfery, RL Kintner, E Jaehnig, ... Investigative ophthalmology & visual science 44 (6), 2657-2668, 2003 | 28 | 2003 |
