Articles with public access mandates - Bapteste EricLearn more
Not available anywhere: 1
Analysis of Microbial Diversity: Regarding the (Paradoxical) Difficulty of Seeing Big in Metagenomics
C Vigliotti, P Lopez, E Bapteste
Biodiversity and Evolution, 63-87, 2018
Mandates: European Commission
Available somewhere: 45
Prokaryotic evolution and the tree of life are two different things
E Bapteste, MA O'Malley, RG Beiko, M Ereshefsky, JP Gogarten, ...
Biology direct 4, 1-20, 2009
Mandates: German Research Foundation
Chimeric origins of ochrophytes and haptophytes revealed through an ancient plastid proteome
RG Dorrell, G Gile, G Mccallum, R Méheust, EP Bapteste, CM Klinger, ...
elife 6, e23717, 2017
Mandates: Gordon and Betty Moore Foundation, European Commission
Network-thinking: graphs to analyze microbial complexity and evolution
E Corel, P Lopez, R Méheust, E Bapteste
Trends in Microbiology 24 (3), 224-237, 2016
Mandates: European Commission
Microbial dark matter investigations: how microbial studies transform biological knowledge and empirically sketch a logic of scientific discovery
G Bernard, JS Pathmanathan, R Lannes, P Lopez, E Bapteste
Genome biology and evolution 10 (3), 707-715, 2018
Mandates: European Commission
Local mobile gene pools rapidly cross species boundaries to create endemicity within global Vibrio cholerae populations
Y Boucher, OX Cordero, A Takemura, DE Hunt, K Schliep, E Bapteste, ...
MBio 2 (2), 10.1128/mbio. 00335-10, 2011
Mandates: US National Institutes of Health
Evolutionary analyses of non-genealogical bonds produced by introgressive descent
E Bapteste, P Lopez, F Bouchard, F Baquero, JO McInerney, RM Burian
Proceedings of the National Academy of Sciences 109 (45), 18266-18272, 2012
Mandates: Science Foundation Ireland
The public goods hypothesis for the evolution of life on Earth
JO McInerney, D Pisani, E Bapteste, MJ O'Connell
Biology direct 6, 1-17, 2011
Mandates: Science Foundation Ireland
Alternative methods for concatenation of core genes indicate a lack of resolution in deep nodes of the prokaryotic phylogeny
E Bapteste, E Susko, J Leigh, I Ruiz-Trillo, J Bucknam, WF Doolittle
Molecular Biology and Evolution 25 (1), 83-91, 2008
Mandates: Canadian Institutes of Health Research
Gene similarity networks provide tools for understanding eukaryote origins and evolution
D Alvarez-Ponce, P Lopez, E Bapteste, JO McInerney
Proceedings of the National Academy of Sciences 110 (17), E1594-E1603, 2013
Mandates: Science Foundation Ireland
Integron‐associated gene cassettes in Halifax Harbour: assessment of a mobile gene pool in marine sediments
JE Koenig, Y Boucher, RL Charlebois, C Nesbø, O Zhaxybayeva, ...
Environmental Microbiology 10 (4), 1024-1038, 2008
Mandates: Canadian Institutes of Health Research
Using sequence similarity networks to identify partial cognates in multilingual wordlists
JM List, P Lopez, E Bapteste
Proceedings of the 54th Annual Meeting of the Association for Computational …, 2016
Mandates: German Research Foundation
Unity and disunity in evolutionary sciences: process-based analogies open common research avenues for biology and linguistics
JM List, JS Pathmanathan, P Lopez, E Bapteste
Biology Direct 11, 1-17, 2016
Mandates: German Research Foundation, European Commission
EGN: a wizard for construction of gene and genome similarity networks
S Halary, JO McInerney, P Lopez, E Bapteste
BMC Evolutionary Biology 13, 1-9, 2013
Mandates: Genome Canada
Testing ecological theories with sequence similarity networks: marine ciliates exhibit similar geographic dispersal patterns as multicellular organisms
D Forster, L Bittner, S Karkar, M Dunthorn, S Romac, S Audic, P Lopez, ...
BMC biology 13, 1-16, 2015
Mandates: German Research Foundation, European Commission
Protein networks identify novel symbiogenetic genes resulting from plastid endosymbiosis
R Méheust, E Zelzion, D Bhattacharya, P Lopez, E Bapteste
Proceedings of the National Academy of Sciences 113 (13), 3579-3584, 2016
Mandates: European Commission
A pluralistic account of homology: adapting the models to the data
LS Haggerty, PA Jachiet, WP Hanage, DA Fitzpatrick, P Lopez, ...
Molecular biology and evolution 31 (3), 501-516, 2014
Mandates: Science Foundation Ireland, UK Biotechnology and Biological Sciences …
Studying genome heterogeneity within the arbuscular mycorrhizal fungal cytoplasm
E Boon, S Halary, E Bapteste, M Hijri
Genome Biology and Evolution 7 (2), 505-521, 2015
Mandates: European Commission
Divergent genomic trajectories predate the origin of animals and fungi
E Ocaña-Pallarès, TA Williams, D López-Escardó, AS Arroyo, ...
Nature 609 (7928), 747-753, 2022
Mandates: Gordon and Betty Moore Foundation, UK Natural Environment Research Council …
Extensive gene remodeling in the viral world: new evidence for nongradual evolution in the mobilome network
PA Jachiet, P Colson, P Lopez, E Bapteste
Genome biology and evolution 6 (9), 2195-2205, 2014
Mandates: European Commission
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