Improving imputation quality in BEAGLE for crop and livestock data T Pook, M Mayer, J Geibel, S Weigend, D Cavero, CC Schoen, ... G3: Genes, Genomes, Genetics 10 (1), 177-188, 2020 | 63 | 2020 |
How array design creates SNP ascertainment bias J Geibel, C Reimer, S Weigend, A Weigend, T Pook, H Simianer PloS one 16 (3), e0245178, 2021 | 59 | 2021 |
MoBPS-modular breeding program simulator T Pook, M Schlather, H Simianer G3: Genes, Genomes, Genetics 10 (6), 1915-1918, 2020 | 52 | 2020 |
HaploBlocker: creation of subgroup-specific haplotype blocks and libraries T Pook, M Schlather, G de Los Campos, M Mayer, CC Schoen, ... Genetics 212 (4), 1045-1061, 2019 | 43 | 2019 |
Using local convolutional neural networks for genomic prediction T Pook, J Freudenthal, A Korte, H Simianer Frontiers in genetics 11, 561497, 2020 | 35 | 2020 |
Newly developed MAGIC population allows identification of strong associations and candidate genes for anthocyanin pigmentation in eggplant G Mangino, A Arrones, M Plazas, T Pook, J Prohens, P Gramazio, ... Frontiers in Plant Science 13, 847789, 2022 | 28 | 2022 |
A unifying concept of animal breeding programmes H Simianer, L Büttgen, A Ganesan, NT Ha, T Pook Journal of Animal Breeding and Genetics 138 (2), 137-150, 2021 | 17 | 2021 |
How imputation can mitigate SNP ascertainment Bias J Geibel, C Reimer, T Pook, S Weigend, A Weigend, H Simianer BMC genomics 22 (1), 340, 2021 | 13 | 2021 |
Accounting for epistasis improves genomic prediction of phenotypes with univariate and bivariate models across environments E Vojgani, T Pook, JWR Martini, AC Hölker, M Mayer, CC Schön, ... Theoretical and Applied Genetics 134, 2913-2930, 2021 | 12 | 2021 |
Simulation study on the integration of health traits in horse breeding programs L Büttgen, J Geibel, H Simianer, T Pook Animals 10 (7), 1153, 2020 | 10 | 2020 |
Turning the PAGE – the potential of genome editing in breeding for complex traits revisited H Simianer, T Pook, M Schlather Proc. 11th World Congress on Genetics Applied to Livestock Production …, 2018 | 9 | 2018 |
Increasing calling accuracy, coverage, and read-depth in sequence data by the use of haplotype blocks T Pook, A Nemri, EG Gonzalez Segovia, D Valle Torres, H Simianer, ... PLoS Genetics 17 (12), e1009944, 2021 | 8 | 2021 |
MoBPSweb: A web-based framework to simulate and compare breeding programs T Pook, L Büttgen, A Ganesan, NT Ha, H Simianer G3 11 (2), jkab023, 2021 | 6 | 2021 |
The pig pangenome provides insights into the roles of coding structural variations in genetic diversity and adaptation Z Li, X Liu, C Wang, Z Li, B Jiang, R Zhang, L Tong, Y Qu, S He, H Chen, ... Genome Research 33 (10), 1833-1847, 2023 | 5 | 2023 |
Genomic prediction using information across years with epistatic models and dimension reduction via haplotype blocks E Vojgani, AC Hölker, M Mayer, CC Schön, H Simianer, T Pook PLoS one 18 (3), e0282288, 2023 | 5 | 2023 |
Development and validation of a horse reference panel for genotype imputation P Reich, C Falker-Gieske, T Pook, J Tetens Genetics Selection Evolution 54 (1), 49, 2022 | 5 | 2022 |
The Modular Breeding Program Simulator (MoBPS) allows efficient simulation of complex breeding programs T Pook, C Reimer, A Freudenberg, L Büttgen, J Geibel, A Ganesan, ... Animal Production Science, 2021 | 5 | 2021 |
Phenotype prediction under epistasis E Vojgani, T Pook, H Simianer Epistasis: Methods and Protocols, 105-120, 2021 | 5 | 2021 |
Accelerated matrix-vector multiplications for matrices involving genotype covariates with applications in genomic prediction A Freudenberg, J Vandenplas, M Schlather, T Pook, R Evans, ... Frontiers in Genetics 14, 1220408, 2023 | 4 | 2023 |
Imputation of low‐density marker chip data in plant breeding: Evaluation of methods based on sugar beet T Niehoff, T Pook, M Gholami, T Beissinger The Plant Genome 15 (4), e20257, 2022 | 3 | 2022 |