GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics M Zvyagin, A Brace, K Hippe, Y Deng, B Zhang, CO Bohorquez, A Clyde, ... The International Journal of High Performance Computing Applications 37 (6 …, 2023 | 59 | 2023 |
PyBIDS: Python tools for BIDS datasets T Yarkoni, CJ Markiewicz, A de la Vega, KJ Gorgolewski, T Salo, ... Journal of open source software 4 (40), 2019 | 43 | 2019 |
Boutiques: a flexible framework to integrate command-line applications in computing platforms T Glatard, G Kiar, T Aumentado-Armstrong, N Beck, P Bellec, R Bernard, ... GigaScience 7 (5), giy016, 2018 | 40 | 2018 |
Brainhack: Developing a culture of open, inclusive, community-driven neuroscience R Gau, S Noble, K Heuer, KL Bottenhorn, IP Bilgin, YF Yang, ... Neuron 109 (11), 1769-1775, 2021 | 38 | 2021 |
Workflows community summit 2022: A roadmap revolution RF da Silva, RM Badia, V Bala, D Bard, PT Bremer, I Buckley, ... arXiv preprint arXiv:2304.00019, 2023 | 25 | 2023 |
A performance comparison of dask and apache spark for data-intensive neuroimaging pipelines M Dugré, V Hayot-Sasson, T Glatard 2019 IEEE/ACM Workflows in Support of Large-Scale Science (WORKS), 40-49, 2019 | 21 | 2019 |
Planning for ecological connectivity across scales of governance in a multifunctional regional landscape L Parrott, C Kyle, V Hayot-Sasson, C Bouchard, JA Cardille Ecosystems and People 15 (1), 204-213, 2019 | 16 | 2019 |
Cloud services enable efficient ai-guided simulation workflows across heterogeneous resources L Ward, JG Pauloski, V Hayot-Sasson, R Chard, Y Babuji, G Sivaraman, ... 2023 IEEE International Parallel and Distributed Processing Symposium …, 2023 | 9 | 2023 |
Boutiques: a flexible framework for automated application integration in computing platforms T Glatard, G Kiar, T Aumentado-Armstrong, N Beck, P Bellec, R Bernard, ... arXiv preprint arXiv:1711.09713, 2017 | 9 | 2017 |
Accelerating communications in federated applications with transparent object proxies JG Pauloski, V Hayot-Sasson, L Ward, N Hudson, C Sabino, ... Proceedings of the International Conference for High Performance Computing …, 2023 | 8 | 2023 |
Performance Evaluation of Big Data Processing Strategies for Neuroimaging V Hayot-Sasson, ST Brown, T Glatard 2019 19th IEEE/ACM International Symposium on Cluster, Cloud and Grid …, 2019 | 5 | 2019 |
Lazy python dependency management in large-scale systems A Kamatar, M Sakarvadia, V Hayot-Sasson, K Chard, I Foster 2023 IEEE 19th International Conference on e-Science (e-Science), 1-10, 2023 | 4 | 2023 |
Modeling the Linux page cache for accurate simulation of data-intensive applications HD Do, V Hayot-Sasson, RF Da Silva, C Steele, H Casanova, T Glatard 2021 IEEE International Conference on Cluster Computing (CLUSTER), 398-408, 2021 | 3 | 2021 |
Performance benefits of Intel® Optane™ DC persistent memory for the parallel processing of large neuroimaging data V Hayot-Sasson, ST Brown, T Glatard 2020 20th IEEE/ACM International Symposium on Cluster, Cloud and Internet …, 2020 | 3 | 2020 |
Evaluation of pilot jobs for Apache Spark applications on HPC clusters V Hayot-Sasson, T Glatard 2019 15th International Conference on eScience (eScience), 146-155, 2019 | 3 | 2019 |
Sequential algorithms to split and merge ultra-high resolution 3D images V Hayot-Sasson, Y Gao, Y Yan, T Glatard 2017 IEEE International Conference on Big Data (Big Data), 415-424, 2017 | 3 | 2017 |
Object Proxy Patterns for Accelerating Distributed Applications JG Pauloski, V Hayot-Sasson, L Ward, A Brace, A Bauer, K Chard, I Foster arXiv preprint arXiv:2407.01764, 2024 | 2 | 2024 |
Performance comparison of Dask and Apache Spark on HPC systems for neuroimaging M Dugré, V Hayot‐Sasson, T Glatard Concurrency and Computation: Practice and Experience 35 (21), e7635, 2023 | 2 | 2023 |
Proceedings of the OHBM Brainhack 2021 A Nikolaidis, M Mancini, T Auer, KL Bottenhorn, E Alonso-Ortiz, ... Aperture Neuro 3, 1-20, 2023 | 2 | 2023 |
Workflows Community Summit 2022: A Roadmap Revolution R Ferreira Da Silva, R Badia, V Bala, D Bard, PT Bremer, I Buckley, ... Oak Ridge National Laboratory (ORNL), Oak Ridge, TN (United States), 2023 | 2 | 2023 |