Articles with public access mandates - W James KentLearn more
Not available anywhere: 3
Comparative genomic analysis using the UCSC genome browser
D Karolchik, G Bejerano, AS Hinrichs, RM Kuhn, W Miller, ...
Comparative Genomics, 17-33, 2008
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
Understanding genome browsing
MS Cline, WJ Kent
Nature biotechnology 27 (2), 153-155, 2009
Mandates: US National Institutes of Health
Databases and Genome Browsers
RA Harte, D Karolchik, RM Kuhn, WJ Kent, D Haussler
Vogel and Motulsky's Human Genetics, 905-921, 2010
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
Available somewhere: 67
An integrated encyclopedia of DNA elements in the human genome
ENCODE Project Consortium
Nature 489 (7414), 57, 2012
Mandates: US National Institutes of Health
An integrated map of genetic variation from 1,092 human genomes
1000 Genomes Project Consortium
Nature 491 (7422), 56, 2012
Mandates: US National Institutes of Health, Howard Hughes Medical Institute, British …
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
Mandates: German Research Foundation
Genetic effects on gene expression across human tissues
GTEx Consortium Lead analysts: Aguet François 1 Brown Andrew A. 2 3 4 Castel ...
Nature 550 (7675), 204-213, 2017
Mandates: US National Science Foundation, US National Institutes of Health, Natural …
The GTEx Consortium atlas of genetic regulatory effects across human tissues
GTEx Consortium
Science 369 (6509), 1318-1330, 2020
Mandates: Swiss National Science Foundation, US National Institutes of Health, Gordon …
A comparative encyclopedia of DNA elements in the mouse genome
F Yue, Y Cheng, A Breschi, J Vierstra, W Wu, T Ryba, R Sandstrom, Z Ma, ...
Nature 515 (7527), 355-364, 2014
Mandates: US National Institutes of Health, Howard Hughes Medical Institute, UK …
The UCSC genome browser database: update 2011
PA Fujita, B Rhead, AS Zweig, AS Hinrichs, D Karolchik, MS Cline, ...
Nucleic acids research 39 (suppl_1), D876-D882, 2010
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
A high-resolution map of human evolutionary constraint using 29 mammals
K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ...
Nature 478 (7370), 476-482, 2011
Mandates: US National Institutes of Health, Howard Hughes Medical Institute, Austrian …
BigWig and BigBed: enabling browsing of large distributed datasets
WJ Kent, AS Zweig, G Barber, AS Hinrichs, D Karolchik
Bioinformatics 26 (17), 2204-2207, 2010
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
Integrative Analysis of the Caenorhabditis elegans Genome by the modENCODE Project
MB Gerstein, ZJ Lu, EL Van Nostrand, C Cheng, BI Arshinoff, T Liu, ...
Science 330 (6012), 1775-1787, 2010
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
Identification of Functional Elements and Regulatory Circuits by Drosophila modENCODE
modENCODE Consortium, S Roy, J Ernst, PV Kharchenko, P Kheradpour, ...
Science 330 (6012), 1787-1797, 2010
Mandates: Swiss National Science Foundation, US National Institutes of Health, Howard …
The UCSC genome browser database: 2015 update
KR Rosenbloom, J Armstrong, GP Barber, J Casper, H Clawson, ...
Nucleic acids research 43 (D1), D670-D681, 2015
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
Toil enables reproducible, open source, big biomedical data analyses
J Vivian, AA Rao, FA Nothaft, C Ketchum, J Armstrong, A Novak, J Pfeil, ...
Nature biotechnology 35 (4), 314-316, 2017
Mandates: US National Institutes of Health
The UCSC Genome Browser database: extensions and updates 2013
LR Meyer, AS Zweig, AS Hinrichs, D Karolchik, RM Kuhn, M Wong, ...
Nucleic acids research 41 (D1), D64-D69, 2012
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
ENCODE data in the UCSC Genome Browser: year 5 update
KR Rosenbloom, CA Sloan, VS Malladi, TR Dreszer, K Learned, ...
Nucleic acids research 41 (D1), D56-D63, 2012
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
The UCSC genome browser and associated tools
RM Kuhn, D Haussler, WJ Kent
Briefings in bioinformatics 14 (2), 144-161, 2013
Mandates: US National Institutes of Health, Howard Hughes Medical Institute
Spatiotemporal gene expression trajectories reveal developmental hierarchies of the human cortex
TJ Nowakowski, A Bhaduri, AA Pollen, B Alvarado, MA Mostajo-Radji, ...
Science 358 (6368), 1318-1323, 2017
Mandates: US National Institutes of Health, US Department of Veterans Affairs, Damon …
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