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Ilan Wapinski
Ilan Wapinski
Verified email at sanofi.com
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Cited by
Year
Comparative genomics reveals mobile pathogenicity chromosomes in Fusarium
LJ Ma, HC Van Der Does, KA Borkovich, JJ Coleman, MJ Daboussi, ...
Nature 464 (7287), 367-373, 2010
17012010
Natural history and evolutionary principles of gene duplication in fungi
I Wapinski, A Pfeffer, N Friedman, A Regev
Nature 449 (7158), 54-61, 2007
7132007
Proto-genes and de novo gene birth
AR Carvunis, T Rolland, I Wapinski, MA Calderwood, MA Yildirim, ...
Nature 487 (7407), 370-374, 2012
6382012
Construction and analysis of two genome-scale deletion libraries for Bacillus subtilis
BM Koo, G Kritikos, JD Farelli, H Todor, K Tong, H Kimsey, I Wapinski, ...
Cell systems 4 (3), 291-305. e7, 2017
5412017
Comparative functional genomics of the fission yeasts
N Rhind, Z Chen, M Yassour, DA Thompson, BJ Haas, N Habib, ...
Science 332 (6032), 930-936, 2011
5402011
Combination therapies including cilofexor and firsocostat for bridging fibrosis and cirrhosis attributable to NASH
R Loomba, M Noureddin, KV Kowdley, A Kohli, A Sheikh, G Neff, ...
Hepatology 73 (2), 625-643, 2021
2062021
Automatic genome-wide reconstruction of phylogenetic gene trees
I Wapinski, A Pfeffer, N Friedman, A Regev
Bioinformatics 23 (13), i549-i558, 2007
1722007
Support vector machine classification on the web
P Pavlidis, I Wapinski, WS Noble
Bioinformatics 20 (4), 586-587, 2004
1712004
Human-interpretable image features derived from densely mapped cancer pathology slides predict diverse molecular phenotypes
JA Diao, JK Wang, WF Chui, V Mountain, SC Gullapally, R Srinivasan, ...
Nature communications 12 (1), 1613, 2021
1642021
A machine learning approach enables quantitative measurement of liver histology and disease monitoring in NASH
A Taylor‐Weiner, H Pokkalla, L Han, C Jia, R Huss, C Chung, H Elliott, ...
Hepatology 74 (1), 133-147, 2021
1472021
Comparative analysis of mycobacterium and related actinomycetes yields insight into the evolution of mycobacterium tuberculosis pathogenesis
AM McGuire, B Weiner, ST Park, I Wapinski, S Raman, G Dolganov, ...
BMC genomics 13, 1-27, 2012
1132012
Stress-related genomic responses during the course of heat acclimation and its association with ischemic-reperfusion cross-tolerance
M Horowitz, L Eli-Berchoer, I Wapinski, N Friedman, E Kodesh
Journal of applied physiology 97 (4), 1496-1507, 2004
1132004
Evolutionary principles of modular gene regulation in yeasts
DA Thompson, S Roy, M Chan, MP Styczynsky, J Pfiffner, C French, ...
Elife 2, e00603, 2013
942013
Gene duplication and the evolution of ribosomal protein gene regulation in yeast
I Wapinski, J Pfiffner, C French, A Socha, DA Thompson, A Regev
Proceedings of the National Academy of Sciences 107 (12), 5505-5510, 2010
812010
Physiological and molecular evidence of heat acclimation memory: a lesson from thermal responses and ischemic cross-tolerance in the heart
A Tetievsky, O Cohen, L Eli-Berchoer, G Gerstenblith, MD Stern, ...
Physiological genomics 34 (1), 78-87, 2008
732008
Arboretum: reconstruction and analysis of the evolutionary history of condition-specific transcriptional modules
S Roy, I Wapinski, J Pfiffner, C French, A Socha, J Konieczka, N Habib, ...
Genome Research 23 (6), 1039-1050, 2013
622013
A functional selection model explains evolutionary robustness despite plasticity in regulatory networks
N Habib, I Wapinski, H Margalit, A Regev, N Friedman
Molecular systems biology 8 (1), 619, 2012
602012
Processes and host cells for genome, pathway, and biomolecular engineering
JH Konieczka, JE Spoonamore, IN Wapinski, FJ Isaacs, GB Foley
US Patent 9,944,925, 2018
402018
A machine learning approach to liver histological evaluation predicts clinically significant portal hypertension in NASH cirrhosis
J Bosch, C Chung, OM Carrasco‐Zevallos, SA Harrison, MF Abdelmalek, ...
Hepatology 74 (6), 3146-3160, 2021
362021
Revisiting the Saccharomyces cerevisiae predicted ORFeome
QR Li, AR Carvunis, H Yu, JDJ Han, Q Zhong, N Simonis, S Tam, T Hao, ...
Genome research 18 (8), 1294-1303, 2008
362008
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