Articles with public access mandates - Emilie MullerLearn more
Available somewhere: 20
Methylobacterium Genome Sequences: A Reference Blueprint to Investigate Microbial Metabolism of C1 Compounds from Natural and Industrial Sources
S Vuilleumier, L Chistoserdova, MC Lee, F Bringel, A Lajus, Y Zhou, ...
PloS one 4 (5), e5584, 2009
Mandates: US National Institutes of Health
Colonization and succession within the human gut microbiome by archaea, bacteria, and microeukaryotes during the first year of life
L Wampach, A Heintz-Buschart, A Hogan, EEL Muller, S Narayanasamy, ...
Frontiers in microbiology 8, 738, 2017
Mandates: Swedish Research Council, Luxembourg National Research Fund
Systematic design of 18S rRNA gene primers for determining eukaryotic diversity in microbial consortia
LW Hugerth, EEL Muller, YOO Hu, LAM Lebrun, H Roume, D Lundin, ...
PloS one 9 (4), e95567, 2014
Mandates: Swedish Research Council for Environment, Agricultural Sciences and Spatial …
A year of monitoring 20 mesophilic full-scale bioreactors reveals the existence of stable but different core microbiomes in bio-waste and wastewater anaerobic digestion systems
M Calusinska, X Goux, M Fossépré, EEL Muller, P Wilmes, P Delfosse
Biotechnology for biofuels 11, 1-19, 2018
Mandates: Luxembourg National Research Fund
Ninety-nine de novo assembled genomes from the moose (Alces alces) rumen microbiome provide new insights into microbial plant biomass degradation
O Svartström, J Alneberg, N Terrapon, V Lombard, I de Bruijn, J Malmsten, ...
The ISME journal 11 (11), 2538-2551, 2017
Mandates: Swedish Research Council for Environment, Agricultural Sciences and Spatial …
Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks
H Roume, A Heintz-Buschart, EEL Muller, P May, VP Satagopam, ...
npj Biofilms and Microbiomes 1 (1), 1-11, 2015
Mandates: US National Institutes of Health
Using metabolic networks to resolve ecological properties of microbiomes
EEL Muller, K Faust, S Widder, M Herold, SM Arbas, P Wilmes
Current Opinion in Systems Biology 8, 73-80, 2018
Mandates: Austrian Science Fund, Luxembourg National Research Fund
Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage
EEL Muller, N Pinel, CC Laczny, MR Hoopmann, S Narayanasamy, ...
Nature communications 5 (1), 5603, 2014
Mandates: US Department of Energy, US National Institutes of Health
Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance
M Herold, S Martínez Arbas, S Narayanasamy, AR Sheik, ...
Nature communications 11 (1), 5281, 2020
Mandates: US National Institutes of Health, Luxembourg National Research Fund
Roles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics
S Martínez Arbas, S Narayanasamy, M Herold, LA Lebrun, ...
Nature microbiology 6 (1), 123-135, 2021
Mandates: US National Institutes of Health, Luxembourg National Research Fund
Integrated meta-omic analyses of the gastrointestinal tract microbiome in patients undergoing allogeneic hematopoietic stem cell transplantation
A Kaysen, A Heintz-Buschart, EEL Muller, S Narayanasamy, L Wampach, ...
Translational Research 186, 79-94. e1, 2017
Mandates: Luxembourg National Research Fund
Determining microbial niche breadth in the environment for better ecosystem fate predictions
EEL Muller
MSystems 4 (3), 10.1128/msystems. 00080-19, 2019
Mandates: Agence Nationale de la Recherche
Expressed protein profile of a Tectomicrobium and other microbial symbionts in the marine sponge Aplysina aerophoba as evidenced by metaproteomics
M Chaib De Mares, DJ Jiménez, G Palladino, J Gutleben, LA Lebrun, ...
Scientific Reports 8 (1), 11795, 2018
Mandates: Government of Spain
Hopanoid-free Methylobacterium extorquens DM4 overproduces carotenoids and has widespread growth impairment
AS Bradley, PK Swanson, EEL Muller, F Bringel, SM Caroll, A Pearson, ...
PLoS One 12 (3), e0173323, 2017
Mandates: US National Science Foundation, US National Institutes of Health
Challenges, strategies, and perspectives for reference-independent longitudinal multi-omic microbiome studies
S Martínez Arbas, SB Busi, P Queirós, L de Nies, M Herold, P May, ...
Frontiers in Genetics 12, 666244, 2021
Mandates: Swiss National Science Foundation, European Commission, Luxembourg National …
First draft genome sequence of a strain belonging to the Zoogloea genus and its gene expression in situ
EEL Muller, S Narayanasamy, M Zeimes, CC Laczny, LA Lebrun, ...
Standards in Genomic Sciences 12, 1-8, 2017
Mandates: Luxembourg National Research Fund
Dichloromethane Degradation Pathway from Unsequenced Hyphomicrobium sp. MC8b Rapidly Explored by Pan-Proteomics
K Hayoun, E Geersens, CC Laczny, R Halder, C Lázaro Sánchez, ...
Microorganisms 8 (12), 1876, 2020
Mandates: Agence Nationale de la Recherche
Sequential isolation of DNA, RNA, protein, and metabolite fractions from murine organs and intestinal contents for integrated omics of host–microbiota interactions
P Shah, EEL Muller, LA Lebrun, L Wampach, P Wilmes
Microbial proteomics: methods and protocols, 279-291, 2018
Mandates: Luxembourg National Research Fund
Forecasting the dynamics of a complex microbial community using integrated meta-omics
F Delogu, BJ Kunath, PM Queirós, R Halder, LA Lebrun, PB Pope, P May, ...
Nature Ecology & Evolution 8 (1), 32-44, 2024
Mandates: Austrian Science Fund, European Commission, Luxembourg National Research …
Forecasting of a complex microbial community using meta-omics
F Delogu, BJ Kunath, PM Queirós, R Halder, LA Lebrun, PB Pope, P May, ...
bioRxiv, 2022.10. 19.512887, 2022
Mandates: Austrian Science Fund, European Commission, Luxembourg National Research …
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