Articles with public access mandates - James YorkeLearn more
Not available anywhere: 1
Noise-induced chaotic-attractor escape route
V Agarwal, JA Yorke, B Balachandran
Nonlinear Dynamics 102, 863-876, 2020
Mandates: US National Science Foundation
Available somewhere: 44
The MaSuRCA genome assembler
AV Zimin, G Marçais, D Puiu, M Roberts, SL Salzberg, JA Yorke
Bioinformatics 29 (21), 2669-2677, 2013
Mandates: US National Institutes of Health
A whole-genome assembly of the domestic cow, Bos taurus
AV Zimin, AL Delcher, L Florea, DR Kelley, MC Schatz, D Puiu, ...
Genome biology 10, 1-10, 2009
Mandates: US National Institutes of Health
Butterfly genome reveals promiscuous exchange of mimicry adaptations among species
Nature 487 (7405), 94-98, 2012
Mandates: US National Institutes of Health
The Atlantic salmon genome provides insights into rediploidization
S Lien, BF Koop, SR Sandve, JR Miller, MP Kent, T Nome, TR Hvidsten, ...
Nature 533 (7602), 200-205, 2016
Mandates: US Department of Agriculture, Genome Canada, Natural Sciences and …
GAGE: A critical evaluation of genome assemblies and assembly algorithms
SL Salzberg, AM Phillippy, A Zimin, D Puiu, T Magoc, S Koren, ...
Genome research 22 (3), 557-567, 2012
Mandates: US National Institutes of Health
Multi-Platform Next-Generation Sequencing of the Domestic Turkey (Meleagris gallopavo): Genome Assembly and Analysis
RA Dalloul, JA Long, AV Zimin, L Aslam, K Beal, L Ann Blomberg, ...
PLoS biology 8 (9), e1000475, 2010
Mandates: US National Institutes of Health
Hybrid assembly of the large and highly repetitive genome of Aegilops tauschii, a progenitor of bread wheat, with the MaSuRCA mega-reads algorithm
AV Zimin, D Puiu, MC Luo, T Zhu, S Koren, G Marçais, JA Yorke, J Dvořák, ...
Genome research 27 (5), 787-792, 2017
Mandates: US National Science Foundation, US National Institutes of Health
Edge of chaos in a parallel shear flow
JD Skufca, JA Yorke, B Eckhardt
Physical review letters 96 (17), 174101, 2006
Mandates: German Research Foundation
Draft genome of the globally widespread and invasive Argentine ant (Linepithema humile)
CD Smith, A Zimin, C Holt, E Abouheif, R Benton, E Cash, V Croset, ...
Proceedings of the National Academy of Sciences 108 (14), 5673-5678, 2011
Mandates: US National Institutes of Health
Turbulence transition and the edge of chaos in pipe flow
TM Schneider, B Eckhardt, JA Yorke
Physical review letters 99 (3), 034502, 2007
Mandates: German Research Foundation
Sequence of the sugar pine megagenome
KA Stevens, JL Wegrzyn, A Zimin, D Puiu, M Crepeau, C Cardeno, R Paul, ...
Genetics 204 (4), 1613-1626, 2016
Mandates: US Department of Agriculture
A new rhesus macaque assembly and annotation for next-generation sequencing analyses
AV Zimin, AS Cornish, MD Maudhoo, RM Gibbs, X Zhang, S Pandey, ...
Biology direct 9, 1-15, 2014
Mandates: US National Institutes of Health
An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencing
AV Zimin, KA Stevens, MW Crepeau, D Puiu, JL Wegrzyn, JA Yorke, ...
Gigascience 6 (1), giw016, 2017
Mandates: US National Institutes of Health, US Department of Agriculture
The Douglas-fir genome sequence reveals specialization of the photosynthetic apparatus in Pinaceae
DB Neale, PE McGuire, NC Wheeler, KA Stevens, MW Crepeau, ...
G3: Genes, Genomes, Genetics 7 (9), 3157-3167, 2017
Mandates: US Department of Agriculture
QuorUM: an error corrector for Illumina reads
G Marçais, JA Yorke, A Zimin
PLoS One 10 (6), e0130821, 2015
Mandates: US National Institutes of Health
Period-doubling cascades galore
E Sander, JA Yorke
Ergodic theory and dynamical systems 31 (4), 1249-1267, 2011
Mandates: US National Institutes of Health
Testing for basins of Wada
A Daza, A Wagemakers, MAF Sanjuán, JA Yorke
Scientific Reports 5 (1), 1-7, 2015
Mandates: Government of Spain
Connecting period-doubling cascades to chaos
E Sander, JA Yorke
International Journal of Bifurcation and Chaos 22 (02), 1250022, 2012
Mandates: US National Institutes of Health
Unsupervised learning of dense optical flow, depth and egomotion with event-based sensors
C Ye, A Mitrokhin, C Fermüller, JA Yorke, Y Aloimonos
2020 IEEE/RSJ International Conference on Intelligent Robots and Systems …, 2020
Mandates: US National Science Foundation, US Department of Defense
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