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James Kirby
James Kirby
University of California, Berkeley
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Year
Production of the antimalarial drug precursor artemisinic acid in engineered yeast
DK Ro, EM Paradise, M Ouellet, KJ Fisher, KL Newman, JM Ndungu, ...
Nature 440 (7086), 940-943, 2006
35622006
Biosynthesis of plant isoprenoids: perspectives for microbial engineering
J Kirby, JD Keasling
Annual review of plant biology 60, 335-355, 2009
5422009
Engineering of the pyruvate dehydrogenase bypass in Saccharomyces cerevisiae for high-level production of isoprenoids
Y Shiba, EM Paradise, J Kirby, DK Ro, JD Keasling
Metabolic engineering 9 (2), 160-168, 2007
4052007
Rhodosporidium toruloides: a new platform organism for conversion of lignocellulose into terpene biofuels and bioproducts
J Yaegashi, J Kirby, M Ito, J Sun, T Dutta, M Mirsiaghi, ER Sundstrom, ...
Biotechnology for biofuels 10 (1), 1-13, 2017
1722017
Redirection of flux through the FPP branch‐point in Saccharomyces cerevisiae by down‐regulating squalene synthase
EM Paradise, J Kirby, R Chan, JD Keasling
Biotechnology and bioengineering 100 (2), 371-378, 2008
1712008
Engineering triterpene production in Saccharomyces cerevisiae–β‐amyrin synthase from Artemisia annua
J Kirby, DW Romanini, EM Paradise, JD Keasling
The FEBS journal 275 (8), 1852-1859, 2008
1572008
Anaerobic Central Metabolic Pathways in Shewanella oneidensis MR-1 Reinterpreted in the Light of Isotopic Metabolite Labeling
YJ Tang, AL Meadows, J Kirby, JD Keasling
Journal of Bacteriology 189 (3), 894-901, 2007
1222007
Cloning of casbene and neocembrene synthases from Euphorbiaceae plants and expression in Saccharomyces cerevisiae
J Kirby, M Nishimoto, JG Park, ST Withers, F Nowroozi, D Behrendt, ...
Phytochemistry 71 (13), 1466-1473, 2010
1202010
Metabolic engineering of microorganisms for isoprenoid production
J Kirby, JD Keasling
Natural product reports 25 (4), 656-661, 2008
1122008
Dockerin-like sequences in cellulases and xylanases from the rumen cellulolytic bacterium Ruminococcus flavefaciens
J Kirby, JC Martin, AS Daniel, HJ Flint
FEMS microbiology letters 149 (2), 213-219, 1997
891997
Production and quantification of sesquiterpenes in Saccharomyces cerevisiae, including extraction, detection and quantification of terpene products and key related …
S Rodriguez, J Kirby, CM Denby, JD Keasling
Nature protocols 9 (8), 1980-1996, 2014
822014
Enhancing Terpene Yield from Sugars via Novel Routes to 1-Deoxy-d-Xylulose 5-Phosphate
J Kirby, M Nishimoto, RWN Chow, EEK Baidoo, G Wang, J Martin, ...
Applied and environmental microbiology 81 (1), 130-138, 2015
682015
EndB, a multidomain family 44 cellulase from Ruminococcus flavefaciens 17, binds to cellulose via a novel cellulose-binding module and to another R. flavefaciens protein via a …
MT Rincón, SI McCrae, J Kirby, KP Scott, HJ Flint
Applied and Environmental Microbiology 67 (10), 4426-4431, 2001
662001
High-titer production of lathyrane diterpenoids from sugar by engineered Saccharomyces cerevisiae
J Wong, T de Rond, L d’Espaux, C van der Horst, I Dev, L Rios-Solis, ...
Metabolic engineering 45, 142-148, 2018
622018
Engineering a functional 1-deoxy-D-xylulose 5-phosphate (DXP) pathway in Saccharomyces cerevisiae
J Kirby, KL Dietzel, G Wichmann, R Chan, E Antipov, N Moss, EEK Baidoo, ...
Metabolic engineering 38, 494-503, 2016
542016
Optimization of DsRed production in Escherichia coli: Effect of ribosome binding site sequestration on translation efficiency
BF Pfleger, NJ Fawzi, JD Keasling
Biotechnology and bioengineering 92 (5), 553-558, 2005
482005
A toolset of constitutive promoters for metabolic engineering of Rhodosporidium toruloides
LC Nora, M Wehrs, J Kim, JF Cheng, A Tarver, BA Simmons, J Magnuson, ...
Microbial cell factories 18, 1-11, 2019
472019
Functional characterization of four sesquiterpene synthases from Ricinus communis (castor bean)
X Xie, J Kirby, JD Keasling
Phytochemistry 78, 20-28, 2012
472012
Further engineering of R. toruloides for the production of terpenes from lignocellulosic biomass
J Kirby, GM Geiselman, J Yaegashi, J Kim, X Zhuang, MB Tran-Gyamfi, ...
Biotechnology for biofuels 14 (1), 1-16, 2021
442021
Production of ent-kaurene from lignocellulosic hydrolysate in Rhodosporidium toruloides
GM Geiselman, X Zhuang, J Kirby, MB Tran-Gyamfi, JP Prahl, ...
Microbial cell factories 19 (1), 1-12, 2020
402020
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