Articles with public access mandates - Sünje Johanna PampLearn more
Not available anywhere: 1
Comparative genomics of toxigenic and non-toxigenic Staphylococcus hyicus
P Leekitcharoenphon, SJ Pamp, LO Andresen, FM Aarestrup
Veterinary Microbiology 185, 34-40, 2016
Mandates: Danish Council for Strategic Research
Available somewhere: 30
Gut immune maturation depends on colonization with a host-specific microbiota
H Chung, SJ Pamp, JA Hill, NK Surana, SM Edelman, EB Troy, ...
Cell 149 (7), 1578-1593, 2012
Mandates: US National Institutes of Health, Danish Council for Independent Research
Global monitoring of antimicrobial resistance based on metagenomics analyses of urban sewage
RS Hendriksen, P Munk, P Njage, B Van Bunnik, L McNally, ...
Nature communications 10 (1), 1124, 2019
Mandates: Villum Foundation, European Commission
Nasal Microenvironments and Interspecific Interactions Influence Nasal Microbiota Complexity and S. aureus Carriage
M Yan, SJ Pamp, J Fukuyama, PH Hwang, DY Cho, S Holmes, ...
Cell host & microbe 14 (6), 631-640, 2013
Mandates: US National Institutes of Health, Doris Duke Charitable Foundation
Inactivation of the rhlA gene in Pseudomonas aeruginosa prevents rhamnolipid production, disabling the protection against polymorphonuclear leukocytes
M Van Gennip, LD Christensen, M Alhede, R Phipps, PØ Jensen, ...
Apmis 117 (7), 537-546, 2009
Mandates: US National Institutes of Health
Spx Is a Global Effector Impacting Stress Tolerance and Biofilm Formation in Staphylococcus aureus
SJ Pamp, D Frees, S Engelmann, M Hecker, H Ingmer
Journal of bacteriology 188 (13), 4861-4870, 2006
Mandates: German Research Foundation
Reconstruction of ancient microbial genomes from the human gut
MC Wibowo, Z Yang, M Borry, A Hübner, KD Huang, BT Tierney, ...
Nature 594 (7862), 234-239, 2021
Mandates: US National Institutes of Health, American Heart Association, German …
Impact of sample type and DNA isolation procedure on genomic inference of microbiome composition
BE Knudsen, L Bergmark, P Munk, O Lukjancenko, A Priemé, ...
MSystems 1 (5), 10.1128/msystems. 00095-16, 2016
Mandates: Villum Foundation, European Commission
Genomic insights to control the emergence of vancomycin-resistant enterococci
BP Howden, KE Holt, MMC Lam, T Seemann, S Ballard, GW Coombs, ...
MBio 4 (4), 10.1128/mbio. 00412-13, 2013
Mandates: National Health and Medical Research Council, Australia
Single-cell sequencing provides clues about the host interactions of segmented filamentous bacteria (SFB)
SJ Pamp, ED Harrington, SR Quake, DA Relman, PC Blainey
Genome research 22 (6), 1107-1119, 2012
Mandates: US National Institutes of Health, Danish Council for Independent Research
Specific gut microbiome members are associated with distinct immune markers in pediatric allogeneic hematopoietic stem cell transplantation
AC Ingham, K Kielsen, MS Cilieborg, O Lund, S Holmes, FM Aarestrup, ...
Microbiome 7, 1-22, 2019
Mandates: European Commission
The metabolically active subpopulation in Pseudomonas aeruginosa biofilms survives exposure to membrane-targeting antimicrobials via distinct molecular …
WC Chiang, SJ Pamp, M Nilsson, M Givskov, T Tolker-Nielsen
FEMS Immunology & Medical Microbiology 65 (2), 245-256, 2012
Mandates: Danish Council for Independent Research
Genomics-based identification of microorganisms in human ocular body fluid
P Kirstahler, SS Bjerrum, A Friis-Møller, M la Cour, FM Aarestrup, H Westh, ...
Scientific reports 8 (1), 4126, 2018
Mandates: European Commission
Microbiota long-term dynamics and prediction of acute graft-versus-host disease in pediatric allogeneic stem cell transplantation
AC Ingham, K Kielsen, H Mordhorst, M Ifversen, FM Aarestrup, KG Müller, ...
Microbiome 9, 1-28, 2021
Mandates: European Commission
Standard sample storage conditions have an impact on inferred microbiome composition and antimicrobial resistance patterns
CS Poulsen, RS Kaas, FM Aarestrup, SJ Pamp
Microbiology spectrum 9 (2), e01387-21, 2021
Mandates: European Commission
Extended-spectrum beta-lactamase-producing Escherichia coli and antimicrobial resistance in municipal and hospital wastewaters in Czech Republic: Culture-based and metagenomic …
I Kutilova, M Medvecky, P Leekitcharoenphon, P Munk, M Masarikova, ...
Environmental Research 193, 110487, 2021
Mandates: European Commission
Development of spatial distribution patterns by biofilm cells
JAJ Haagensen, SK Hansen, BB Christensen, SJ Pamp, S Molin
Applied and environmental microbiology 81 (18), 6120-6128, 2015
Mandates: Danish Council for Independent Research
Pathogen surveillance in the informal settlement, Kibera, Kenya, using a metagenomics approach
RS Hendriksen, O Lukjancenko, P Munk, MH Hjelmsø, JR Verani, ...
PLoS One 14 (10), e0222531, 2019
Mandates: Villum Foundation, European Commission
A peek into the plasmidome of global sewage
P Kirstahler, F Teudt, S Otani, FM Aarestrup, SJ Pamp
Msystems 6 (3), 10.1128/msystems. 00283-21, 2021
Mandates: European Commission
Library preparation and sequencing platform introduce bias in metagenomic-based characterizations of microbiomes
CS Poulsen, CT Ekstrøm, FM Aarestrup, SJ Pamp
Microbiology spectrum 10 (2), e00090-22, 2022
Mandates: European Commission
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