| Knotting probability of DNA molecules confined in restricted volumes: DNA knotting in phage capsids J Arsuaga, M Vázquez, S Trigueros, DW Sumners, J Roca Proceedings of the National Academy of Sciences 99 (8), 5373-5377, 2002 | 319 | 2002 |
| DNA knots reveal a chiral organization of DNA in phage capsids J Arsuaga, M Vazquez, P McGuirk, S Trigueros, DW Sumners, J Roca Proceedings of the National Academy of Sciences 102 (26), 9165-9169, 2005 | 289 | 2005 |
| Investigation of viral DNA packaging using molecular mechanics models J Arsuaga, RKZ Tan, M Vazquez, SC Harvey Biophysical chemistry 101, 475-484, 2002 | 152 | 2002 |
| Radiation‐induced chromosome aberrations: insights gained from biophysical modeling L Hlatky, RK Sachs, M Vazquez, MN Cornforth Bioessays 24 (8), 714-723, 2002 | 139 | 2002 |
| Unlinking chromosome catenanes in vivo by site‐specific recombination I Grainge, M Bregu, M Vazquez, V Sivanathan, SCY Ip, DJ Sherratt The EMBO journal 26 (19), 4228-4238, 2007 | 129 | 2007 |
| Chromosomes are predominantly located randomly with respect to each other in interphase human cells MN Cornforth, KM Greulich-Bode, BD Loucas, J Arsuaga, M Vázquez, ... The Journal of cell biology 159 (2), 237-244, 2002 | 128 | 2002 |
| Novel display of knotted DNA molecules by two-dimensional gel electrophoresis S Trigueros, J Arsuaga, ME Vazquez, DW Sumners, J Roca Nucleic acids research 29 (13), e67-e67, 2001 | 93 | 2001 |
| FtsK-dependent XerCD-dif recombination unlinks replication catenanes in a stepwise manner K Shimokawa, K Ishihara, I Grainge, DJ Sherratt, M Vazquez Proceedings of the National Academy of Sciences 110 (52), 20906-20911, 2013 | 77 | 2013 |
| Tangle analysis of Xer recombination reveals only three solutions, all consistent with a single three-dimensional topological pathway M Vazquez, SD Colloms Journal of molecular biology 346 (2), 493-504, 2005 | 68 | 2005 |
| Tangle analysis of Gin site-specific recombination M Vazquez, S DE WITT Mathematical Proceedings of the Cambridge Philosophical Society 136 (3), 565-582, 2004 | 65 | 2004 |
| Bounds for the minimum step number of knots in the simple cubic lattice R Scharein, K Ishihara, J Arsuaga, Y Diao, K Shimokawa, M Vazquez Journal of Physics A: Mathematical and Theoretical 42 (47), 475006, 2009 | 57 | 2009 |
| Applications of computational homology to the analysis of treatment response in breast cancer patients D DeWoskin, J Climent, I Cruz-White, M Vazquez, C Park, J Arsuaga Topology and its Applications 157 (1), 157-164, 2010 | 47 | 2010 |
| Random state transitions of knots: a first step towards modeling unknotting by type II topoisomerases X Hua, D Nguyen, B Raghavan, J Arsuaga, M Vazquez Topology and its Applications 154 (7), 1381-1397, 2007 | 46 | 2007 |
| Chromosome spatial clustering inferred from radiogenic aberrations J Arsuaga, KM Greulich‐Bode, M Vazquez, M Bruckner, P Hahnfeldt, ... International journal of radiation biology 80 (7), 507-515, 2004 | 44 | 2004 |
| Pathways of DNA unlinking: a story of stepwise simplification R Stolz, M Yoshida, R Brasher, M Flanner, K Ishihara, DJ Sherratt, ... Scientific reports 7 (1), 12420, 2017 | 41 | 2017 |
| The Rabl configuration limits topological entanglement of chromosomes in budding yeast M Pouokam, B Cruz, S Burgess, MR Segal, M Vazquez, J Arsuaga Scientific reports 9 (1), 6795, 2019 | 37 | 2019 |
| TangleSolve: topological analysis of site-specific recombination Y Saka, M Vazquez Bioinformatics 18 (7), 1011-1012, 2002 | 37 | 2002 |
| The effects of density on the topological structure of the mitochondrial DNA from trypanosomes Y Diao, K Hinson, R Kaplan, M Vazquez, J Arsuaga Journal of mathematical biology 64, 1087-1108, 2012 | 33 | 2012 |
| On the mean and variance of the writhe of random polygons J Portillo, Y Diao, R Scharein, J Arsuaga, M Vazquez Journal of Physics A: Mathematical and Theoretical 44 (27), 275004, 2011 | 31 | 2011 |
| Tangle analysis of difference topology experiments: applications to a Mu protein-DNA complex I Darcy, J Luecke, M Vazquez Algebraic & Geometric Topology 9 (4), 2247-2309, 2009 | 29 | 2009 |
Koya ShimokawaProfessor, Department of Mathematics, Ochanomizu UniversityVerified email at ocha.ac.jp
