Articles with public access mandates - Robert Castelo (0000-0003-2229-4508)Learn more
Available somewhere: 19
GSVA: gene set variation analysis for microarray and RNA-seq data
S Hänzelmann, R Castelo, J Guinney
BMC bioinformatics 14, 1-15, 2013
Mandates: US National Institutes of Health, Government of Spain
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project
Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ...
nature 447 (7146), 799-816, 2007
Mandates: German Research Foundation
A flexible count data model to fit the wide diversity of expression profiles arising from extensively replicated RNA-seq experiments
M Esnaola, P Puig, D Gonzalez, R Castelo, JR Gonzalez
BMC bioinformatics 14, 1-22, 2013
Mandates: European Commission, Government of Spain
Public data and open source tools for multi-assay genomic investigation of disease
L Kannan, M Ramos, A Re, N El-Hachem, Z Safikhani, DMA Gendoo, ...
Briefings in bioinformatics 17 (4), 603-615, 2016
Mandates: US National Institutes of Health, Government of Spain
Distinct regulatory programs establish widespread sex-specific alternative splicing in Drosophila melanogaster
B Hartmann, R Castelo, B Miñana, E Peden, M Blanchette, DC Rio, ...
Rna 17 (3), 453-468, 2011
Mandates: German Research Foundation
Global analysis of alternative splicing regulation by insulin and wingless signaling in Drosophilacells
B Hartmann, R Castelo, M Blanchette, S Boue, DC Rio, J Valcárcel
Genome biology 10, 1-14, 2009
Mandates: German Research Foundation
The propagation of perturbations in rewired bacterial gene networks
R Baumstark, S Hänzelmann, S Tsuru, Y Schaerli, M Francesconi, ...
Nature communications 6 (1), 10105, 2015
Mandates: Swiss National Science Foundation, Wellcome Trust, European Commission …
GenomicScores: seamless access to genomewide position-specific scores from R and Bioconductor
P Puigdevall, R Castelo
Bioinformatics 34 (18), 3208-3210, 2018
Mandates: Government of Spain
Thrombin stimulates insulin secretion via protease-activated receptor-3
S Hänzelmann, J Wang, E Güney, Y Tang, E Zhang, AS Axelsson, ...
Islets 7 (4), e1118195, 2015
Mandates: Swedish Research Council, Government of Spain
Mapping eQTL networks with mixed graphical Markov models
I Tur, A Roverato, R Castelo
Genetics 198 (4), 1377-1393, 2014
Mandates: Government of Spain
The networked partial correlation and its application to the analysis of genetic interactions
A Roverato, R Castelo
Journal of the Royal Statistical Society: Series C (Applied Statistics) 66 …, 2017
Mandates: Government of Spain
Umbilical cord gene expression reveals the molecular architecture of the fetal inflammatory response in extremely preterm newborns
D Costa, R Castelo
Pediatric research 79, 473-481, 2016
Mandates: US National Institutes of Health, Government of Spain
Inference of regulatory networks from microarray data with R and the Bioconductor package qpgraph
R Castelo, A Roverato
Next Generation Microarray Bioinformatics: Methods and Protocols, 215-233, 2012
Mandates: Government of Spain
Genetic linkage analysis of a large family identifies FIGN as a candidate modulator of reduced penetrance in heritable pulmonary arterial hypertension
P Puigdevall, L Piccari, I Blanco, JA Barberà, D Geiger, C Badenas, ...
Journal of Medical Genetics 56 (7), 481-490, 2019
Mandates: Government of Spain
Path weights in concentration graphs
A Roverato, R Castelo
Biometrika 107 (3), 705-722, 2020
Mandates: US Department of Defense, Government of Spain
Learning undirected graphical models from multiple datasets with the generalized non-rejection rate
A Roverato, R Castelo
International journal of approximate reasoning 53 (9), 1326-1335, 2012
Mandates: Government of Spain
Differential networking with path weights in Gaussian trees
A Roverato, R Castelo
International Conference on Probabilistic Graphical Models, 404-415, 2018
Mandates: US Department of Defense, European Commission, Government of Spain
Microproteins encoded by noncanonical ORFs are a major source of tumor-specific antigens in a liver cancer patient meta-cohort
ME Camarena, P Theunissen, M Ruiz, J Ruiz-Orera, B Calvo-Serra, ...
Science Advances 10 (28), eadn3628, 2024
Mandates: European Commission
Genome‐wide postnatal changes in immunity following fetal inflammatory response
D Costa, N Bonet, A Solé, JM González de Aledo‐Castillo, E Sabidó, ...
The FEBS Journal 288 (7), 2311-2331, 2021
Mandates: Government of Spain
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