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pankaj kumar
pankaj kumar
Bioinformatics Core Director, Associate Professor, University of virginia
Verified email at virginia.edu
Title
Cited by
Cited by
Year
Meta-analysis of tRNA derived RNA fragments reveals that they are evolutionarily conserved and associate with AGO proteins to recognize specific RNA targets
P Kumar, J Anaya, SB Mudunuri, A Dutta
BMC Biology 12 (1), 78, 2014
5772014
Biogenesis and function of transfer RNA-related fragments (tRFs)
P Kumar, C Kuscu, A Dutta
Trends in biochemical sciences 41 (8), 679-689, 2016
4382016
tRNA fragments (tRFs) guide Ago to regulate gene expression post-transcriptionally in a Dicer-independent manner
C Kuscu, P Kumar, M Kiran, Z Su, A Malik, A Dutta
Rna 24 (8), 1093-1105, 2018
3272018
Extrachromosomal microDNAs and chromosomal microdeletions in normal tissues
Y Shibata, P Kumar, R Layer, S Willcox, JR Gagan, JD Griffith, A Dutta
Science 336 (6077), 82-86, 2012
2942012
tRFdb: a database for transfer RNA fragments
P Kumar, SB Mudunuri, J Anaya, A Dutta
Nucleic acids research 43 (D1), D141-D145, 2015
2552015
Discoveries of extrachromosomal circles of DNA in normal and tumor cells
T Paulsen, P Kumar, MM Koseoglu, A Dutta
Trends in Genetics 34 (4), 270-278, 2018
2152018
Normal and cancerous tissues release extrachromosomal circular DNA (eccDNA) into the circulation
P Kumar, LW Dillon, Y Shibata, AA Jazaeri, DR Jones, A Dutta
Molecular Cancer Research 15 (9), 1197-1205, 2017
2142017
Production of extrachromosomal microDNAs is linked to mismatch repair pathways and transcriptional activity
LW Dillon, P Kumar, Y Shibata, YH Wang, S Willcox, JD Griffith, ...
Cell reports 11 (11), 1749-1759, 2015
1732015
Noncanonical roles of tRNAs: tRNA fragments and beyond
Z Su, B Wilson, P Kumar, A Dutta
Annual review of genetics 54 (1), 47-69, 2020
1652020
Epstein-Barr virus nuclear antigen 3C augments Mdm2-mediated p53 ubiquitination and degradation by deubiquitinating Mdm2
A Saha, M Murakami, P Kumar, B Bajaj, K Sims, ES Robertson
Journal of virology 83 (9), 4652-4669, 2009
1322009
ATAC-seq identifies thousands of extrachromosomal circular DNA in cancer and cell lines
P Kumar, S Kiran, S Saha, Z Su, T Paulsen, A Chatrath, Y Shibata, ...
Science advances 6 (20), eaba2489, 2020
1262020
Epstein–Barr virus nuclear antigen 3C targets p53 and modulates its transcriptional and apoptotic activities
F Yi, A Saha, M Murakami, P Kumar, JS Knight, Q Cai, T Choudhuri, ...
Virology 388 (2), 236-247, 2009
1232009
Small extrachromosomal circular DNAs, microDNA, produce short regulatory RNAs that suppress gene expression independent of canonical promoters
T Paulsen, Y Shibata, P Kumar, L Dillon, A Dutta
Nucleic acids research 47 (9), 4586-4596, 2019
1192019
Differential effects of pH on calcium activation of myofilaments of adult and perinatal dog hearts. Evidence for developmental differences in thin filament regulation.
RJ Solaro, P Kumar, EM Blanchard, AF Martin
Circulation research 58 (5), 721-729, 1986
1051986
Epstein-Barr virus nuclear antigen 3C facilitates G1-S transition by stabilizing and enhancing the function of cyclin D1
A Saha, S Halder, SK Upadhyay, J Lu, P Kumar, M Murakami, Q Cai, ...
PLoS pathogens 7 (2), e1001275, 2011
1002011
Permeability pulmonary edema following lung resection
M Mathru, B Blakeman, DJ Dries, B Kleinman, P Kumar
Chest 98 (5), 1216-1218, 1990
971990
Inhibition of innate immune cytosolic surveillance by an M. tuberculosis phosphodiesterase
RJ Dey, B Dey, Y Zheng, LS Cheung, J Zhou, D Sayre, P Kumar, H Guo, ...
Nature chemical biology 13 (2), 210-217, 2017
962017
Hypoxia inactivates the VHL tumor suppressor through PIASy-mediated SUMO modification
Q Cai, SC Verma, P Kumar, M Ma, ES Robertson
PloS one 5 (3), e9720, 2010
912010
Idiopathic carpal tunnel syndrome and trigger finger: is there an association?
P Kumar, I Chakrabarti
Journal of Hand Surgery (European Volume) 34 (1), 58-59, 2009
902009
Identification and functional significance of troponin I isoforms in neonatal rat heart myofibrils.
AF Martin, K Ball, LZ Gao, P Kumar, RJ Solaro
Circulation research 69 (5), 1244-1252, 1991
871991
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