Articles with public access mandates - Martin HartmannLearn more
Not available anywhere: 7
metaxa2: improved identification and taxonomic classification of small and large subunit rRNA in metagenomic data
J Bengtsson‐Palme, M Hartmann, KM Eriksson, C Pal, K Thorell, ...
Molecular ecology resources 15 (6), 1403-1414, 2015
Mandates: Swedish Research Council for Environment, Agricultural Sciences and Spatial …
Bacterial, archaeal and eukaryal community structures throughout soil horizons of harvested and naturally disturbed forest stands
M Hartmann, S Lee, SJ Hallam, WW Mohn
Environmental Microbiology 11 (12), 3045-3062, 2009
Mandates: Genome Canada
V-Xtractor: an open-source, high-throughput software tool to identify and extract hypervariable regions of small subunit (16 S/18 S) ribosomal RNA gene sequences
M Hartmann, CG Howes, K Abarenkov, WW Mohn, RH Nilsson
Journal of microbiological methods 83 (2), 250-253, 2010
Mandates: Genome Canada
Temporal stability of the mouse gut microbiota in relation to innate and adaptive immunity
PA Dimitriu, G Boyce, A Samarakoon, M Hartmann, P Johnson, WW Mohn
Environmental microbiology reports 5 (2), 200-210, 2013
Mandates: Canadian Institutes of Health Research
Biochar affects community composition of nitrous oxide reducers in a field experiment
HM Krause, R Hüppi, J Leifeld, M El-Hadidi, J Harter, A Kappler, ...
Soil Biology and Biochemistry 119, 143-151, 2018
Mandates: Swiss National Science Foundation, Genome Canada
Fungal community structure in soils of conventional and organic farming systems
S Schneider, M Hartmann, J Enkerli, F Widmer
Fungal Ecology 3 (3), 215-224, 2010
Mandates: Swiss National Science Foundation
Taxon-specific fungal preference for distinct soil particle size fractions
M Hemkemeyer, BT Christensen, CC Tebbe, M Hartmann
European Journal of Soil Biology 94, 103103, 2019
Mandates: Genome Canada, German Research Foundation, European Commission
Available somewhere: 50
Distinct soil microbial diversity under long-term organic and conventional farming
M Hartmann, B Frey, J Mayer, P Mäder, F Widmer
The ISME journal 9 (5), 1177-1194, 2015
Mandates: Swiss National Science Foundation
Improved software detection and extraction of ITS1 and ITS 2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data
J Bengtsson‐Palme, M Ryberg, M Hartmann, S Branco, Z Wang, A Godhe, ...
Methods in ecology and evolution 4 (10), 914-919, 2013
Mandates: Swedish Research Council for Environment, Agricultural Sciences and Spatial …
Early life antibiotic‐driven changes in microbiota enhance susceptibility to allergic asthma
SL Russell, MJ Gold, M Hartmann, BP Willing, L Thorson, M Wlodarska, ...
EMBO reports 13 (5), 440-447, 2012
Mandates: Canadian Institutes of Health Research, Genome Canada
Microbes as engines of ecosystem function: when does community structure enhance predictions of ecosystem processes?
EB Graham, JE Knelman, A Schindlbacher, S Siciliano, M Breulmann, ...
Frontiers in microbiology 7, 214, 2016
Mandates: US National Science Foundation, US Department of Energy, UK Natural …
Networking in the plant microbiome
MGA Van Der Heijden, M Hartmann
PLoS biology 14 (2), e1002378, 2016
Mandates: Swiss National Science Foundation, European Commission
Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests
M Hartmann, CG Howes, D VanInsberghe, H Yu, D Bachar, R Christen, ...
The ISME journal 6 (12), 2199-2218, 2012
Mandates: Genome Canada
Microbial diversity in European alpine permafrost and active layers
B Frey, T Rime, M Phillips, B Stierli, I Hajdas, F Widmer, M Hartmann
FEMS microbiology ecology 92 (3), fiw018, 2016
Mandates: Swiss National Science Foundation, Genome Canada
A comprehensive, automatically updated fungal ITS sequence dataset for reference-based chimera control in environmental sequencing efforts
RH Nilsson, L Tedersoo, M Ryberg, E Kristiansson, M Hartmann, ...
Microbes and environments 30 (2), 145-150, 2015
Mandates: Genome Canada, Swedish Research Council for Environment, Agricultural …
Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences
RH Nilsson, L Tedersoo, K Abarenkov, M Ryberg, E Kristiansson, ...
MycoKeys 4, 37-63, 2012
Mandates: US National Institutes of Health, Genome Canada, Swedish Research Council …
Vertical distribution of the soil microbiota along a successional gradient in a glacier forefield
T Rime, M Hartmann, I Brunner, F Widmer, J Zeyer, B Frey
Molecular Ecology 24 (5), 1091-1108, 2015
Mandates: Swiss National Science Foundation, Genome Canada
Improving ITS sequence data for identification of plant pathogenic fungi
RH Nilsson, KD Hyde, J Pawłowska, M Ryberg, L Tedersoo, AB Aas, ...
Fungal Diversity 67, 11-19, 2014
Mandates: Genome Canada, Swedish Research Council for Environment, Agricultural …
A decade of irrigation transforms the soil microbiome of a semi‐arid pine forest
M Hartmann, I Brunner, F Hagedorn, RD Bardgett, B Stierli, C Herzog, ...
Molecular Ecology 26 (4), 1190-1206, 2017
Mandates: Swiss National Science Foundation
Potential sources of microbial colonizers in an initial soil ecosystem after retreat of an alpine glacier
T Rime, M Hartmann, B Frey
The ISME journal 10 (7), 1625-1641, 2016
Mandates: Swiss National Science Foundation, Genome Canada
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