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Vincent de Bakker
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Exploration of bacterial bottlenecks and Streptococcus pneumoniae pathogenesis by CRISPRi-Seq
X Liu, JM Kimmey, L Matarazzo, V de Bakker, L Van Maele, JC Sirard, ...
Cell Host & Microbe 29 (1), 107-120. e6, 2021
982021
CRISPRi-seq for genome-wide fitness quantification in bacteria
V de Bakker, X Liu, AM Bravo, JW Veening
Nature Protocols 17 (2), 252-281, 2022
492022
Deep divergence and genomic diversification of gut symbionts of neotropical stingless bees
G Sarton-Lohéac, CG Nunes da Silva, F Mazel, G Baud, V de Bakker, ...
MBio 14 (2), e03538-22, 2023
132023
Amoxicillin-resistant Streptococcus pneumoniae can be resensitized by targeting the mevalonate pathway as indicated by sCRilecs-seq
L Dewachter, J Dénéréaz, X Liu, V de Bakker, C Costa, M Baldry, ...
elife 11, e75607, 2022
132022
Genome-wide CRISPRi screens reveal the essentialome and determinants for susceptibility to dalbavancin in Staphylococcus aureus
X Liu, V de Bakker, MV Heggenhougen, MT Mårli, AH Frøynes, ...
bioRxiv, 2023.08. 30.555613, 2023
62023
Effectiveness of a child-friendly astronomy news platform for science learning–An exploratory study
HTD Tran, P Russo, V de Bakker
European Journal of Science and Mathematics Education 6 (4), 113-128, 2018
32018
A conserved antigen induces respiratory Th17-mediated broad serotype protection against pneumococcal superinfection
X Liu, L Van Maele, L Matarazzo, D Soulard, VAD da Silva, V de Bakker, ...
Cell Host & Microbe 32 (3), 304-314. e8, 2024
22024
Klebsiella pneumoniae OmpR facilitates lung infection through transcriptional regulation of key virulence factors
AB Janssen, V De Bakker, R Aprianto, V Trebosc, C Kemmer, M Pieren, ...
Microbiology Spectrum 12 (1), e03966-23, 2024
22024
A conserved antigen induces respiratory Th17-mediated serotype-independent protection against pneumococcal superinfection
X Liu, L Van Maele, L Matarazzo, D Soulard, V Alves Duarte da Silva, ...
bioRxiv, 2023.07. 07.548156, 2023
22023
Genome-wide CRISPRi screens for high-throughput fitness quantification and identification of determinants for dalbavancin susceptibility in Staphylococcus aureus
X Liu, V de Bakker, MV Heggenhougen, MT Mårli, AH Frøynes, ...
Msystems, e01289-23, 2024
12024
Dual CRISPRi-Seq for genome-wide genetic interaction studies identifies key genes involved in the pneumococcal cell cycle
J Denereaz, E Eray, B Jana, V de Bakker, H Todor, T van Opijnen, X Liu, ...
bioRxiv, 2024.08. 14.607739, 2024
2024
PneumoBrowse 2: An integrated visual platform for curated genome annotation and multiomics data analysis of Streptococcus pneumoniae
AB Janssen, PS Gibson, AM Bravo, V de Bakker, J Slager, JW Veening
bioRxiv, 2024.08. 07.606308, 2024
2024
Inference Through Interference: Bacterial Fitness Landscapes by CRISPRi-seq
V De Bakker
éditeur non identifié, 2023
2023
CRISPR interference knockdown screen identifies novel proteins involved in formation of structured macrocolonies in Staphylococcus aureus.
M Kjos, DM Angeles, MT Mårli, MV Heggenhougen, V de Bakker, X Liu, ...
biofilms9, 2020
2020
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