TSGene 2.0: an updated literature-based knowledgebase for tumor suppressor genes M Zhao, P Kim, R Mitra, J Zhao, Z Zhao Nucleic acids research 44 (D1), D1023-D1031, 2016 | 347 | 2016 |
Development of the human cancer microRNA network S Bandyopadhyay, R Mitra, U Maulik, MQ Zhang Silence 1, 1-14, 2010 | 275 | 2010 |
TargetMiner: microRNA target prediction with systematic identification of tissue-specific negative examples S Bandyopadhyay, R Mitra (corresponding author) Bioinformatics 25 (20), 2625-2631, 2009 | 263 | 2009 |
Decoding critical long non-coding RNA in ovarian cancer epithelial-to-mesenchymal transition R Mitra, X Chen, EJ Greenawalt, U Maulik, W Jiang, Z Zhao, ... Nature Communications, 2017 | 172 | 2017 |
MicroRNA-31 initiates lung tumorigenesis and promotes mutant KRAS-driven lung cancer MD Edmonds, KL Boyd, T Moyo, R Mitra, R Duszynski, MP Arrate, X Chen, ... The Journal of clinical investigation 126 (1), 349-364, 2016 | 111 | 2016 |
MBSTAR: multiple instance learning for predicting specific functional binding sites in microRNA targets S Bandyopadhyay, D Ghosh, R Mitra, Z Zhao Scientific reports 5 (1), 8004, 2015 | 84 | 2015 |
Pan-cancer analysis reveals cooperativity of both strands of microRNA that regulate tumorigenesis and patient survival R Mitra, CM Adams, W Jiang, E Greenawalt, CM Eischen Nature Communications 11 (1), 968, 2020 | 67 | 2020 |
The Potential Roles of Long Noncoding RNAs (lncRNA) in Glioblastoma Development S Liu, R Mitra (co-first author), MM Zhao, W Fan, CM Eischen, F Yin, ... Molecular cancer therapeutics 15 (12), 2977-2986, 2016 | 66 | 2016 |
MultiMiTar: a novel multi objective optimization based miRNA-target prediction method R Mitra, S Bandyopadhyay PloS one 6 (9), e24583, 2011 | 63 | 2011 |
Reproducible combinatorial regulatory networks elucidate novel oncogenic microRNAs in non-small cell lung cancer R Mitra, MD Edmonds, J Sun, M Zhao, H Yu, CM Eischen, Z Zhao Rna 20 (9), 1356-1368, 2014 | 59 | 2014 |
BCL-W has a fundamental role in B cell survival and lymphomagenesis CM Adams, AS Kim, R Mitra, JK Choi, JZ Gong, CM Eischen The Journal of clinical investigation 127 (2), 635-650, 2017 | 57 | 2017 |
MicroRNA and transcription factor co-regulatory networks and subtype classification of seminoma and non-seminoma in testicular germ cell tumors G Qin, S Mallik, R Mitra, A Li, P Jia, CM Eischen, Z Zhao Scientific Reports 10 (1), 852, 2020 | 54 | 2020 |
Mdm2 is required for survival and growth of p53-deficient cancer cells K Feeley, CM Adams, R Mitra, CM Eischen Cancer Research, 2017 | 52 | 2017 |
Systematic dissection of dysregulated transcription factor–miRNA feed-forward loops across tumor types W Jiang, R Mitra(co-first author), CC Lin, Q Wang, F Cheng, Z Zhao Briefings in bioinformatics 17 (6), 996-1008, 2015 | 52 | 2015 |
Concordant dysregulation of miR-5p and miR-3p arms of the same precursor microRNA may be a mechanism in inducing cell proliferation and tumorigenesis: a lung cancer study R Mitra, CC Lin, CM Eischen, S Bandyopadhyay, Z Zhao Rna 21 (6), 1055-1065, 2015 | 46 | 2015 |
Targeting of SGK1 by miR-576-3p inhibits lung adenocarcinoma migration and invasion Greenawalt, E Evan J, J Mick D, A Neha, ECM Clare M, Mitra Ramkrishna Molecular Cancer Research, 2018 | 43 | 2018 |
Targeted MDM2 degradation reveals a new vulnerability for p53-inactivated triple-negative breast cancer CM Adams, R Mitra, Y Xiao, P Michener, J Palazzo, A Chao, J Gour, ... Cancer discovery 13 (5), 1210-1229, 2023 | 38 | 2023 |
Non-Hodgkin and Hodgkin lymphomas select for overexpression of BCLW CM Adams, R Mitra (co-first author), J Gong, CM Eischen Clinical Cancer Research 23 (22), 7119-7129, 2017 | 38 | 2017 |
IL-33 is a cell-intrinsic regulator of fitness during early B cell development MT Stier, R Mitra, LE Nyhoff, K Goleniewska, J Zhang, MV Puccetti, ... The Journal of Immunology 203 (6), 1457-1467, 2019 | 31 | 2019 |
miRcorrNet: machine learning-based integration of miRNA and mRNA expression profiles, combined with feature grouping and ranking M Yousef, G Goy, R Mitra, CM Eischen, A Jabeer, B Bakir-Gungor PeerJ 9, e11458, 2021 | 29 | 2021 |