| High-throughput mapping of the phage resistance landscape in E. coli VK Mutalik, BA Adler, HS Rishi, D Piya, C Zhong, B Koskella, EM Kutter, ... PLoS biology 18 (10), e3000877, 2020 | 120 | 2020 |
| Broad-spectrum CRISPR-Cas13a enables efficient phage genome editing BA Adler, T Hessler, BF Cress, A Lahiri, VK Mutalik, R Barrangou, ... Nature microbiology 7 (12), 1967-1979, 2022 | 53* | 2022 |
| Structural basis for AcrVA4 inhibition of specific CRISPR-Cas12a GJ Knott, BF Cress, JJ Liu, BW Thornton, RJ Lew, B Al-Shayeb, ... Elife 8, e49110, 2019 | 47 | 2019 |
| The genetic basis of phage susceptibility, cross-resistance and host-range in Salmonella BA Adler, AE Kazakov, C Zhong, H Liu, E Kutter, LM Lui, TN Nielsen, ... Microbiology 167 (12), 001126, 2021 | 43* | 2021 |
| SCHEMA computational design of virus capsid chimeras: calibrating how genome packaging, protection, and transduction correlate with calculated structural disruption ML Ho, BA Adler, ML Torre, JJ Silberg, J Suh ACS synthetic biology 2 (12), 724-733, 2013 | 40 | 2013 |
| A naturally DNase-free CRISPR-Cas12c enzyme silences gene expression CJ Huang, BA Adler, JA Doudna Molecular cell 82 (11), 2148-2160. e4, 2022 | 39 | 2022 |
| Improved genome editing by an engineered CRISPR-Cas12a E Ma, K Chen, H Shi, EC Stahl, B Adler, M Trinidad, J Liu, K Zhou, J Ye, ... Nucleic Acids Research 50 (22), 12689-12701, 2022 | 32 | 2022 |
| A versatile platform strain for high-fidelity multiplex genome editing RG Egbert, HS Rishi, BA Adler, DM McCormick, E Toro, RT Gill, AP Arkin Nucleic acids research 47 (6), 3244-3256, 2019 | 19 | 2019 |
| Sequential membrane-and protein-bound organelles compartmentalize genomes during phage infection EG Armbruster, J Lee, J Hutchings, AR VanderWal, E Enustun, BA Adler, ... bioRxiv, 2023 | 10 | 2023 |
| Multicopy suppressor screens reveal convergent evolution of single-gene lysis proteins BA Adler, K Chamakura, H Carion, J Krog, AM Deutschbauer, R Young, ... Nature chemical biology 19 (6), 759-766, 2023 | 10* | 2023 |
| CasPEDIA Database: a functional classification system for class 2 CRISPR-Cas enzymes BA Adler, MI Trinidad, D Bellieny-Rabelo, E Zhang, HM Karp, ... Nucleic acids research 52 (D1), D590-D596, 2024 | 7 | 2024 |
| A phage nucleus-associated RNA-binding protein is required for jumbo phage infection E Enustun, EG Armbruster, J Lee, S Zhang, BA Yee, K Malukhina, Y Gu, ... Nucleic Acids Research 52 (8), 4440-4455, 2024 | 6 | 2024 |
| Eukaryotic RNA-guided endonucleases evolved from a unique clade of bacterial enzymes PH Yoon, P Skopintsev, H Shi, LX Chen, BA Adler, M Al-Shimary, ... Nucleic Acids Research 51 (22), 12414-12427, 2023 | 6 | 2023 |
| Genome-wide Characterization of Diverse Bacteriophages Enabled by RNA-Binding CRISPRi BA Adler, MJ Al-Shimary, JR Patel, E Ambruster, D Colognori, EJ Charles, ... bioRxiv, 2023.09. 18.558157, 2023 | 5 | 2023 |
| To TnpB or not TnpB? Cas12 is the answer PH Yoon, BA Adler, JA Doudna Nature Chemical Biology 19 (3), 263-264, 2023 | 3 | 2023 |
| An essential and highly selective protein import pathway encoded by nucleus-forming phage CJ Morgan, E Enustun, EG Armbruster, EA Birkholz, A Prichard, T Forman, ... Proceedings of the National Academy of Sciences 121 (19), e2321190121, 2024 | 2 | 2024 |
| Hachiman is a genome integrity sensor OT Tuck, BA Adler, EG Armbruster, A Lahiri, JJ Hu, J Zhou, J Pogliano, ... bioRxiv, 2024 | 1 | 2024 |
| Toph (true retrieval of proteins homologs): Adapting a contrastive question-answering framework for protein search R Boger, A Lu, S Chithrananda, K Yang, P Skopintsev, B Adler, E Wallace, ... ICML workshop on computational biology, 2023 | 1 | 2023 |
| Suggested searches V Attah, DS Milner, Y Fang, X Yan, G Leonard, J Heitman, TA Richards, ... Perspective, 2024 | | 2024 |
| Genetic elements and defense systems drive diversification and evolution in Asgard archaea LE Valentin Alvarado, LD Shi, KE Appler, A Crits-Christoph, ML Cui, ... bioRxiv, 2024.03. 22.586370, 2024 | | 2024 |
Jennifer DoudnaProfessor of Molecular and Cell Biology and Chemistry, UC BerkeleyVerified email at berkeley.edu
