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Daniel J. Macqueen
Daniel J. Macqueen
Professor & Head of Genome Biology Division, The Roslin Institute, University of Edinburgh
Verified email at roslin.ed.ac.uk - Homepage
Title
Cited by
Cited by
Year
Growth and the regulation of myotomal muscle mass in teleost fish
IA Johnston, NI Bower, DJ Macqueen
Journal of Experimental Biology 214 (10), 1617-1628, 2011
4722011
A well-constrained estimate for the timing of the salmonid whole genome duplication reveals major decoupling from species diversification
DJ Macqueen, IA Johnston
Proceedings of the Royal Society B: Biological Sciences 281 (1778), 20132881, 2014
4432014
Harnessing genomics to fast-track genetic improvement in aquaculture
RD Houston, TP Bean, DJ Macqueen, MK Gundappa, YH Jin, TL Jenkins, ...
Nature Reviews Genetics 21 (7), 389-409, 2020
3662020
Embryonic temperature affects muscle fibre recruitment in adult zebrafish: genome-wide changes in gene and microRNA expression associated with the transition from hyperplastic …
IA Johnston, HT Lee, DJ Macqueen, K Paranthaman, C Kawashima, ...
Journal of Experimental Biology 212 (12), 1781-1793, 2009
1892009
Lineage-specific rediploidization is a mechanism to explain time-lags between genome duplication and evolutionary diversification
FM Robertson, MK Gundappa, F Grammes, TR Hvidsten, AK Redmond, ...
Genome biology 18, 1-14, 2017
1652017
Coupling of diversification and pH adaptation during the evolution of terrestrial Thaumarchaeota
C Gubry-Rangin, C Kratsch, TA Williams, AC McHardy, TM Embley, ...
Proceedings of the National Academy of Sciences 112 (30), 9370-9375, 2015
1092015
Evolution of the multifaceted eukaryotic akiringene family
DJ Macqueen, IA Johnston
BMC evolutionary biology 9, 1-20, 2009
1082009
Temperature until the ‘eyed stage’of embryogenesis programmes the growth trajectory and muscle phenotype of adult Atlantic salmon
DJ Macqueen, DHF Robb, T Olsen, L Melstveit, CGM Paxton, IA Johnston
Biology Letters 4 (3), 294-298, 2008
1022008
Evolution of ancient functions in the vertebrate insulin-like growth factor system uncovered by study of duplicated salmonid fish genomes
DJ Macqueen, D Garcia de la serrana, IA Johnston
Molecular Biology and Evolution 30 (5), 1060-1076, 2013
1012013
Functional Annotation of All Salmonid Genomes (FAASG): an international initiative supporting future salmonid research, conservation and aquaculture
DJ Macqueen, CR Primmer, RD Houston, BF Nowak, L Bernatchez, ...
BMC genomics 18 (1), 484, 2017
972017
From FAANG to fork: application of highly annotated genomes to improve farmed animal production
EL Clark, AL Archibald, HD Daetwyler, MAM Groenen, PW Harrison, ...
Genome Biology 21, 1-9, 2020
892020
High-throughput proteomic profiling of the fish liver following bacterial infection
DR Causey, MAN Pohl, DA Stead, SAM Martin, CJ Secombes, ...
BMC genomics 19, 1-17, 2018
862018
The structural variation landscape in 492 Atlantic salmon genomes
AC Bertolotti, RM Layer, MK Gundappa, MD Gallagher, E Pehlivanoglu, ...
Nature Communications 11 (1), 5176, 2020
852020
Insulin-like growth factor-binding proteins of teleost fishes
D Garcia de la Serrana, DJ Macqueen
Frontiers in Endocrinology 9, 80, 2018
822018
Atlantic salmon (Salmo salar L.) genetics in the 21st century: taking leaps forward in aquaculture and biological understanding
RD Houston, DJ Macqueen
Animal Genetics 50 (1), 3-14, 2019
802019
Comparative regulomics supports pervasive selection on gene dosage following whole genome duplication
GB Gillard, L Grønvold, LL Røsæg, MM Holen, Ø Monsen, BF Koop, ...
Genome Biology 22, 1-18, 2021
67*2021
Discovery of all three types in cartilaginous fishes enables phylogenetic resolution of the origins and evolution of interferons
AK Redmond, J Zou, CJ Secombes, DJ Macqueen, H Dooley
Frontiers in immunology 10, 1558, 2019
642019
Disparate developmental patterns of immune responses to bacterial and viral infections in fish
R Castro, L Jouneau, L Tacchi, DJ Macqueen, A Alzaid, CJ Secombes, ...
Scientific Reports 5 (1), 15458, 2015
602015
Temperature influences the coordinated expression of myogenic regulatory factors during embryonic myogenesis in Atlantic salmon (Salmo salarL.)
DJ Macqueen, D Robb, IA Johnston
Journal of Experimental Biology 210 (16), 2781-2794, 2007
592007
Salmonid genomes have a remarkably expanded akirin family, coexpressed with genes from conserved pathways governing skeletal muscle growth and catabolism
DJ Macqueen, BK Kristjánsson, IA Johnston
Physiological genomics 42 (1), 134-148, 2010
562010
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