Articles with public access mandates - Thomas PetersonLearn more
Not available anywhere: 2
Evolutionary impacts of alternative transposition
W Su, SP Sharma, T Peterson
Origin and evolution of biodiversity, 113-130, 2018
Mandates: US Department of Agriculture
Generation and Analysis of Transposon Ac/Ds-Induced Chromosomal Rearrangements in Rice Plants
YH Xuan, T Peterson, C Han
Chromosome and Genomic Engineering in Plants: Methods and Protocols, 49-61, 2016
Mandates: US Department of Agriculture
Available somewhere: 20
Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline
S Ou, W Su, Y Liao, K Chougule, JRA Agda, AJ Hellinga, CSB Lugo, ...
Genome biology 20, 1-18, 2019
Mandates: US National Science Foundation, US Department of Agriculture, Canada First …
High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases
F Zhang, ML Maeder, E Unger-Wallace, JP Hoshaw, D Reyon, ...
Proceedings of the National Academy of Sciences 107 (26), 12028-12033, 2010
Mandates: US National Institutes of Health
TIR-Learner, a new ensemble method for TIR transposable element annotation, provides evidence for abundant new transposable elements in the maize genome
W Su, X Gu, T Peterson
Molecular plant 12 (3), 447-460, 2019
Mandates: US Department of Agriculture
Toward an automatic method for extracting cancer-and other disease-related point mutations from the biomedical literature
E Doughty, A Kertesz-Farkas, O Bodenreider, G Thompson, A Adadey, ...
Bioinformatics 27 (3), 408-415, 2011
Mandates: US National Institutes of Health
Protected Health Information filter (Philter): accurately and securely de-identifying free-text clinical notes
B Norgeot, K Muenzen, TA Peterson, X Fan, BS Glicksberg, G Schenk, ...
NPJ digital medicine 3 (1), 57, 2020
Mandates: US National Institutes of Health
Oncodomains: A protein domain-centric framework for analyzing rare variants in tumor samples
TA Peterson, IIM Gauran, J Park, DH Park, MG Kann
PLoS computational biology 13 (4), e1005428, 2017
Mandates: US National Science Foundation, US National Institutes of Health
A tutorial of EDTA: extensive de novo TE annotator
W Su, S Ou, MB Hufford, T Peterson
Plant Transposable Elements: Methods and Protocols, 55-67, 2021
Mandates: US National Science Foundation, US Department of Agriculture
Regulatory Single‐Nucleotide Variant Predictor Increases Predictive Performance of Functional Regulatory Variants
TA Peterson, M Mort, DN Cooper, P Radivojac, MG Kann, SD Mooney
Human mutation 37 (11), 1137-1143, 2016
Mandates: US National Institutes of Health
Small RNA-Mediated De Novo Silencing of Ac/Ds Transposons Is Initiated by Alternative Transposition in Maize
D Wang, J Zhang, T Zuo, M Zhao, D Lisch, T Peterson
Genetics 215 (2), 393-406, 2020
Mandates: US National Science Foundation, US National Institutes of Health, US …
Empirical null estimation using zero-inflated discrete mixture distributions and its application to protein domain data
IIM Gauran, J Park, J Lim, DH Park, J Zylstra, T Peterson, M Kann, ...
Biometrics 74 (2), 458-471, 2018
Mandates: US National Institutes of Health
Predictive models for length of stay and discharge disposition in elective spine surgery: development, validation, and comparison to the ACS NSQIP risk calculator
A Arora, D Lituiev, D Jain, D Hadley, AJ Butte, S Berven, TA Peterson
Spine 48 (1), E1-E13, 2023
Mandates: US National Institutes of Health
Ectopic expression of a maize gene is induced by composite insertions generated through alternative transposition
W Su, T Zuo, T Peterson
Genetics 216 (4), 1039-1049, 2020
Mandates: US Department of Agriculture
Transposon-induced inversions activate gene expression in the maize pericarp
SP Sharma, T Zuo, T Peterson
Genetics 218 (2), iyab062, 2021
Mandates: US Department of Agriculture
Quantifying variation in treatment utilization for type 2 diabetes across five major University of California health systems
TA Peterson, V Fontil, SK Koliwad, A Patel, AJ Butte
Diabetes Care 44 (4), 908-914, 2021
Mandates: US National Institutes of Health
Complex chromosomal rearrangements induced by transposons in maize
SP Sharma, T Peterson
Genetics 223 (2), iyac124, 2023
Mandates: US Department of Agriculture
Excision and reinsertion of Ac macrotransposons in maize
D Wang, C Yu, J Zhang, T Peterson
Genetics 221 (4), iyac067, 2022
Mandates: US National Institutes of Health, US Department of Agriculture
Rapid detection of transposon-induced genome rearrangements
SP Sharma, T Peterson
Plant Transposable Elements: Methods and Protocols, 131-139, 2021
Mandates: US Department of Agriculture
Maize Transposon Storm Kicks up a White Cap
T Peterson
Genetics 206 (1), 87-89, 2017
Mandates: US Department of Agriculture
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