TAL Effector-Nucleotide Targeter (TALE-NT) 2.0: tools for TAL effector design and target prediction EL Doyle, NJ Booher, DS Standage, DF Voytas, VP Brendel, JK VanDyk, ... Nucleic acids research 40 (W1), W117-W122, 2012 | 695 | 2012 |
Genomewide comparative analysis of alternative splicing in plants BB Wang, V Brendel Proceedings of the National Academy of Sciences 103 (18), 7175-7180, 2006 | 613 | 2006 |
Methods and algorithms for statistical analysis of protein sequences. V Brendel, P Bucher, IR Nourbakhsh, BE Blaisdell, S Karlin Proceedings of the National Academy of Sciences 89 (6), 2002-2006, 1992 | 493 | 1992 |
A computer algorithm for testing potential prokaryotic terminators V Brendel, EN Trifonov Nucleic Acids Research 12 (10), 4411-4427, 1984 | 364 | 1984 |
PlantGDB: a resource for comparative plant genomics J Duvick, A Fu, U Muppirala, M Sabharwal, MD Wilkerson, CJ Lawrence, ... Nucleic acids research 36 (suppl_1), D959-D965, 2007 | 335 | 2007 |
Engineering a software tool for gene structure prediction in higher organisms G Gremme, V Brendel, ME Sparks, S Kurtz Information and Software Technology 47 (15), 965-978, 2005 | 324 | 2005 |
Single nucleotide polymorphisms of human STING can affect innate immune response to cyclic dinucleotides G Yi, VP Brendel, C Shu, P Li, S Palanathan, C Cheng Kao PloS one 8 (10), e77846, 2013 | 278 | 2013 |
MaizeGDB, the community database for maize genetics and genomics CJ Lawrence, Q Dong, ML Polacco, TE Seigfried, V Brendel Nucleic acids research 32 (suppl_1), D393-D397, 2004 | 267 | 2004 |
Patchiness and correlations in DNA sequences S Karlin, V Brendel Science 259 (5095), 677-680, 1993 | 263 | 1993 |
Chance and statistical significance in protein and DNA sequence analysis S Karlin, V Brendel Science 257 (5066), 39-49, 1992 | 244 | 1992 |
PlantGDB, plant genome database and analysis tools Q Dong, SD Schlueter, V Brendel Nucleic acids research 32 (suppl_1), D354-D359, 2004 | 243 | 2004 |
Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp AJ Bogdanove, R Koebnik, H Lu, A Furutani, SV Angiuoli, PB Patil, ... Journal of bacteriology 193 (19), 5450-5464, 2011 | 236 | 2011 |
Linguistics of nucleotide sequences: morphology and comparison of vocabularies V Brendel, JS Beckmann, EN Trifonov Journal of Biomolecular Structure and Dynamics 4 (1), 11-21, 1986 | 214 | 1986 |
The ASRG database: identification and survey of Arabidopsis thalianagenes involved in pre-mRNA splicing BB Wang, V Brendel Genome biology 5, 1-23, 2004 | 204 | 2004 |
Optimal spliced alignment of homologous cDNA to a genomic DNA template J Usuka, W Zhu, V Brendel Bioinformatics 16 (3), 203-211, 2000 | 174 | 2000 |
A compilation of soybean ESTs: generation and analysis R Shoemaker, P Keim, L Vodkin, E Retzel, SW Clifton, R Waterston, ... Genome 45 (2), 329-338, 2002 | 170 | 2002 |
Evolutionary comparisons of RecA-like proteins across all major kingdoms of living organisms V Brendel, L Brocchieri, SJ Sandler, AJ Clark, S Karlin Journal of molecular evolution 44, 528-541, 1997 | 165 | 1997 |
Bacterial classifications derived from RecA protein sequence comparisons S Karlin, GM Weinstock, V Brendel Journal of bacteriology 177 (23), 6881-6893, 1995 | 162 | 1995 |
Terminators of Transcription with RNA Polymerase from Escherichia coli: What They Look Like and How to Find Them V Brendel, GH Hamm, EN Trifonov Journal of Biomolecular Structure and Dynamics 3 (4), 705-723, 1986 | 157 | 1986 |
Genome-Wide Distribution of Transposed Dissociation Elements in Maize E Vollbrecht, J Duvick, JP Schares, KR Ahern, P Deewatthanawong, L Xu, ... The Plant Cell 22 (6), 1667-1685, 2010 | 153 | 2010 |