Articles with public access mandates - John S. SchreckLearn more
Available somewhere: 23
Introducing improved structural properties and salt dependence into a coarse-grained model of DNA
BEK Snodin, F Randisi, M Mosayebi, P Šulc, JS Schreck, F Romano, ...
The Journal of chemical physics 142 (23), 2015
Mandates: Swiss National Science Foundation, UK Engineering and Physical Sciences …
Coarse-graining DNA for simulations of DNA nanotechnology
JPK Doye, TE Ouldridge, AA Louis, F Romano, P Šulc, C Matek, ...
Physical Chemistry Chemical Physics 15 (47), 20395-20414, 2013
Mandates: UK Engineering and Physical Sciences Research Council
Learning retrosynthetic planning through simulated experience
JS Schreck, CW Coley, KJM Bishop
ACS central science 5 (6), 970-981, 2019
Mandates: US Department of Defense, US National Institutes of Health
Coarse-grained modelling of the structural properties of DNA origami
BEK Snodin, JS Schreck, F Romano, AA Louis, JPK Doye
Nucleic acids research 47 (3), 1585-1597, 2019
Mandates: UK Engineering and Physical Sciences Research Council, UK Research & Innovation
DNA hairpins destabilize duplexes primarily by promoting melting rather than by inhibiting hybridization
JS Schreck, TE Ouldridge, F Romano, P Šulc, LP Shaw, AA Louis, ...
Nucleic acids research 43 (13), 6181-6190, 2015
Mandates: UK Engineering and Physical Sciences Research Council
Design principles for rapid folding of knotted DNA nanostructures
V Kočar, JS Schreck, S Čeru, H Gradišar, N Bašić, T Pisanski, JPK Doye, ...
Nature communications 7 (1), 10803, 2016
Mandates: UK Engineering and Physical Sciences Research Council, Slovenian Research Agency
Characterizing the motion of jointed DNA nanostructures using a coarse-grained model
R Sharma, JS Schreck, F Romano, AA Louis, JPK Doye
ACS nano 11 (12), 12426-12435, 2017
Mandates: UK Engineering and Physical Sciences Research Council
Characterizing DNA star-tile-based nanostructures using a coarse-grained model
JS Schreck, F Romano, MH Zimmer, AA Louis, JPK Doye
ACS nano 10 (4), 4236-4247, 2016
Mandates: UK Engineering and Physical Sciences Research Council
DNA bipedal motor walking dynamics: an experimental and theoretical study of the dependency on step size
DC Khara, JS Schreck, TE Tomov, Y Berger, TE Ouldridge, JPK Doye, ...
Nucleic acids research 46 (3), 1553-1561, 2018
Mandates: UK Engineering and Physical Sciences Research Council, UK Research …
Self-assembly of two-dimensional binary quasicrystals: A possible route to a DNA quasicrystal
A Reinhardt, JS Schreck, F Romano, JPK Doye
Journal of Physics: Condensed Matter 29 (1), 014006, 2016
Mandates: UK Engineering and Physical Sciences Research Council
Understanding DNA interactions in crowded environments with a coarse-grained model
F Hong, JS Schreck, P Šulc
Nucleic acids research 48 (19), 10726-10738, 2020
Mandates: US National Science Foundation
Characterizing the bending and flexibility induced by bulges in DNA duplexes
JS Schreck, TE Ouldridge, F Romano, AA Louis, JPK Doye
The Journal of chemical physics 142 (16), 2015
Mandates: UK Engineering and Physical Sciences Research Council
The oxDNA coarse-grained model as a tool to simulate DNA origami
JPK Doye, H Fowler, D Prešern, J Bohlin, L Rovigatti, F Romano, P Šulc, ...
DNA and RNA Origami: Methods and Protocols, 93-112, 2023
Mandates: UK Engineering and Physical Sciences Research Council
Generative and interpretable machine learning for aptamer design and analysis of in vitro sequence selection
A Di Gioacchino, J Procyk, M Molari, JS Schreck, Y Zhou, Y Liu, ...
PLoS computational biology 18 (9), e1010561, 2022
Mandates: US National Science Foundation, European Commission, Agence Nationale de la …
Multi-scale coarse-graining for the study of assembly pathways in DNA-brick self-assembly
P Fonseca, F Romano, JS Schreck, TE Ouldridge, JPK Doye, AA Louis
The Journal of Chemical Physics 148 (13), 2018
Mandates: Fundação para a Ciência e a Tecnologia, Portugal, UK Engineering and …
Machine learning for improving surface-layer-flux estimates
T McCandless, DJ Gagne, B Kosović, SE Haupt, B Yang, C Becker, ...
Boundary-Layer Meteorology 185 (2), 199-228, 2022
Mandates: US National Science Foundation, US Department of Energy, US National Oceanic …
Neural network emulation of the formation of organic aerosols based on the explicit GECKO‐A chemistry model
JS Schreck, C Becker, DJ Gagne, K Lawrence, S Wang, ...
Journal of Advances in Modeling Earth Systems 14 (10), e2021MS002974, 2022
Mandates: US National Science Foundation, US National Aeronautics and Space …
Automated design of 3D DNA origami with non-rasterized 2D curvature
D Fu, R Pradeep Narayanan, A Prasad, F Zhang, D Williams, JS Schreck, ...
Science advances 8 (51), eade4455, 2022
Mandates: US National Science Foundation
On the Application of an Observations‐Based Machine Learning Parameterization of Surface Layer Fluxes Within an Atmospheric Large‐Eddy Simulation Model
D Muñoz‐Esparza, C Becker, JA Sauer, DJ Gagne, J Schreck, B Kosović
Journal of Geophysical Research: Atmospheres 127 (16), e2021JD036214, 2022
Mandates: US National Science Foundation
Neural network processing of holographic images
JS Schreck, G Gantos, M Hayman, A Bensemer, DJ Gagne
Atmospheric Measurement Techniques Discussions 2022, 1-38, 2022
Mandates: US National Science Foundation
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