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Katia de Paiva Lopes
Katia de Paiva Lopes
Systems Analyst and Computational Biologist, PhD.
Verified email at rush.edu - Homepage
Title
Cited by
Cited by
Year
New insights into the genetic etiology of Alzheimer’s disease and related dementias
C Bellenguez, F Küçükali, IE Jansen, L Kleineidam, S Moreno-Grau, ...
Nature genetics 54 (4), 412-436, 2022
12252022
Genetic analysis of the human microglial transcriptome across brain regions, aging and disease pathologies
KP Lopes, GJL Snijders, J Humphrey, A Allan, MAM Sneeboer, E Navarro, ...
Nature genetics 54 (1), 4-17, 2022
1552022
APID interactomes: providing proteome-based interactomes with controlled quality for multiple species and derived networks
D Alonso-Lopez, MA Gutiérrez, KP Lopes, C Prieto, R Santamaría, ...
Nucleic acids research 44 (W1), W529-W535, 2016
1302016
Genetics of the human microglia regulome refines Alzheimer’s disease risk loci
R Kosoy, JF Fullard, B Zeng, J Bendl, P Dong, S Rahman, SP Kleopoulos, ...
Nature genetics 54 (8), 1145-1154, 2022
842022
Integrative transcriptomic analysis of the amyotrophic lateral sclerosis spinal cord implicates glial activation and suggests new risk genes
J Humphrey, S Venkatesh, R Hasan, JT Herb, K de Paiva Lopes, ...
Nature Neuroscience 26 (1), 150-162, 2023
582023
Whole Genome Sequencing of the Pirarucu (Arapaima gigas) Supports Independent Emergence of Major Teleost Clades
RA Vialle, JES de Souza, KP Lopes, DG Teixeira, PA Alves Sobrinho, ...
Genome biology and evolution 10 (9), 2366-2379, 2018
402018
Integrating whole-genome sequencing with multi-omic data reveals the impact of structural variants on gene regulation in the human brain
RA Vialle, K de Paiva Lopes, DA Bennett, JF Crary, T Raj
Nature neuroscience 25 (4), 504-514, 2022
392022
Dysregulation of mitochondrial and proteolysosomal genes in Parkinson’s disease myeloid cells
E Navarro, E Udine, KP Lopes, M Parks, G Riboldi, BM Schilder, ...
Nature aging 1 (9), 850-863, 2021
28*2021
Modulation of defence and iron homeostasis genes in rice roots by the diazotrophic endophyte Herbaspirillum seropedicae
LCC Brusamarello-Santos, D Alberton, G Valdameri, D Camilios-Neto, ...
Scientific reports 9 (1), 10573, 2019
272019
Genome-wide association study and functional validation implicates JADE1 in tauopathy
K Farrell, SH Kim, N Han, MA Iida, EM Gonzalez, M Otero-Garcia, ...
Acta neuropathologica 143, 33-53, 2022
252022
Global miRNA expression profile reveals novel molecular players in aneurysmal subarachnoid haemorrhage
KP Lopes, T Vinasco-Sandoval, RA Vialle, FM Paschoal Jr, VAPA Bastos, ...
Scientific reports 8 (1), 8786, 2018
252018
Transcriptome deregulation of peripheral monocytes and whole blood in GBA-related Parkinson’s disease
GM Riboldi, RA Vialle, E Navarro, E Udine, K de Paiva Lopes, ...
Molecular Neurodegeneration 17 (1), 52, 2022
192022
Global analyses of expressed piwi-interacting RNAs in gastric cancer
T Vinasco-Sandoval, FC Moreira, A F. Vidal, P Pinto, ...
International Journal of Molecular Sciences 21 (20), 7656, 2020
122020
Evolutionary hallmarks of the human proteome: chasing the age and coregulation of protein-coding genes
KP Lopes, FJ Campos-Laborie, RA Vialle, JM Ortega, J De Las Rivas
BMC genomics 17, 337-349, 2016
72016
Associations of cortical SPP1 and ITGAX with cognition and common neuropathologies in older adults
KP Lopes, L Yu, X Shen, Y Qiu, S Tasaki, A Iatrou, MS Beeri, NT Seyfried, ...
Alzheimer's & Dementia 20 (1), 525-537, 2024
62024
Associations of VGF with neuropathologies and cognitive health in older adults
L Yu, VA Petyuk, KP Lopes, S Tasaki, V Menon, Y Wang, JA Schneider, ...
Annals of Neurology 94 (2), 232-244, 2023
52023
Role of miRNAs in sigmoid colon cancer: A search for potential biomarkers
D Marques, LR Ferreira-Costa, LL Ferreira-Costa, AB Bezerra-Oliveira, ...
Cancers 12 (11), 3311, 2020
42020
Bridging the Gap: Multi-Omics Profiling of Brain Tissue in Alzheimer’s Disease and Older Controls in Multi-Ethnic Populations
JS Reddy, L Heath, A Vander Linden, M Allen, K de Paiva Lopes, F Seifar, ...
bioRxiv, 2024
32024
The human microglia responsome: a resource to better understand microglia states in health and disease
G Snijders, K de Paiva Lopes, M Sneeboer, B Muller, F Gigase, R Vialle, ...
bioRxiv, 2023.10. 12.562067, 2023
32023
Atlas of genetic effects in human microglia transcriptome across brain regions, aging and disease pathologies
KP Lopes, GJL Snijders, J Humphrey, LD de Witte, T Raj
Alzheimer's & Dementia 17, e050942, 2021
32021
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Articles 1–20