| Microbiota as predictor of mortality in allogeneic hematopoietic-cell transplantation JU Peled, ALC Gomes, SM Devlin, ER Littmann, Y Taur, AD Sung, ... New England Journal of Medicine 382 (9), 822-834, 2020 | 527 | 2020 |
| The Mycobacterium tuberculosis regulatory network and hypoxia JE Galagan, K Minch, M Peterson, A Lyubetskaya, E Azizi, L Sweet, ... Nature 499 (7457), 178-183, 2013 | 477 | 2013 |
| Multi-omics analyses of radiation survivors identify radioprotective microbes and metabolites H Guo, WC Chou, Y Lai, K Liang, JW Tam, WJ Brickey, L Chen, ... Science 370 (6516), eaay9097, 2020 | 329 | 2020 |
| Principles for designing synthetic microbial communities NI Johns, T Blazejewski, ALC Gomes, HH Wang Current Opinion in Microbiology 31, 146-153, 2016 | 282 | 2016 |
| Lactose drives Enterococcus expansion to promote graft-versus-host disease CK Stein-Thoeringer, KB Nichols, A Lazrak, MD Docampo, ... Science 366 (6469), 1143-1149, 2019 | 267 | 2019 |
| Gut microbiome correlates of response and toxicity following anti-CD19 CAR T cell therapy M Smith, A Dai, G Ghilardi, KV Amelsberg, SM Devlin, R Pajarillo, ... Nature medicine 28 (4), 713-723, 2022 | 157 | 2022 |
| Metagenomic mining of regulatory elements enables programmable species-selective gene expression NI Johns, ALC Gomes, SS Yim, A Yang, T Blazejewski, CS Smillie, ... Nature methods 15 (5), 323-329, 2018 | 102 | 2018 |
| Multiplex transcriptional characterizations across diverse bacterial species using cell‐free systems SS Yim, NI Johns, J Park, ALC Gomes, RM McBee, M Richardson, ... Molecular Systems Biology 15 (8), e8875, 2019 | 68 | 2019 |
| Minimal residual disease negativity in multiple myeloma is associated with intestinal microbiota composition MJ Pianko, SM Devlin, ER Littmann, A Chansakul, D Mastey, M Salcedo, ... Blood advances 3 (13), 2040-2044, 2019 | 63 | 2019 |
| ChIP-Seq and the complexity of bacterial transcriptional regulation J Galagan, A Lyubetskaya, A Gomes Systems biology, 43-68, 2013 | 57 | 2013 |
| Comprehensive Definition of the SigH Regulon of Mycobacterium tuberculosis Reveals Transcriptional Control of Diverse Stress Responses JD Sharp, AK Singh, ST Park, A Lyubetskaya, MW Peterson, ALC Gomes, ... PLoS One 11 (3), e0152145, 2016 | 51 | 2016 |
| Fecal microbiota diversity disruption and clinical outcomes after auto-HCT: a multicenter observational study N Khan, S Lindner, ALC Gomes, SM Devlin, GL Shah, AD Sung, ... Blood, The Journal of the American Society of Hematology 137 (11), 1527-1537, 2021 | 47 | 2021 |
| Role of intragenic binding of cAMP responsive protein (CRP) in regulation of the succinate dehydrogenase genes Rv0249c-Rv0247c in TB complex mycobacteria GS Knapp, A Lyubetskaya, MW Peterson, ALC Gomes, Z Ma, JE Galagan, ... Nucleic Acids Research 43 (11), 5377-5393, 2015 | 36 | 2015 |
| Preservation of the fecal microbiome is associated with reduced severity of graft-versus-host disease M Burgos da Silva, DM Ponce, A Dai, S M. Devlin, ALC Gomes, G Moore, ... Blood, The Journal of the American Society of Hematology 140 (22), 2385-2397, 2022 | 35 | 2022 |
| Characterization of a cAMP responsive transcription factor, Cmr (Rv1675c), in TB complex mycobacteria reveals overlap with the DosR (DevR) dormancy regulon S Ranganathan, G Bai, A Lyubetskaya, GS Knapp, MW Peterson, ... Nucleic Acids Research 44 (1), 134-151, 2016 | 32 | 2016 |
| Early intestinal microbial features are associated with CD4 T-cell recovery after allogeneic hematopoietic transplant O Miltiadous, NR Waters, H Andrlová, A Dai, CL Nguyen, ... Blood, The Journal of the American Society of Hematology 139 (18), 2758-2769, 2022 | 31 | 2022 |
| Decoding ChIP-seq with a double-binding signal refines binding peaks to single-nucleotides and predicts cooperative interaction ALC Gomes, T Abeel, M Peterson, E Azizi, A Lyubetskaya, L Carvalho, ... Genome research 24 (10), 1686-1697, 2014 | 28 | 2014 |
| Transcription factor binding site mapping using ChIP‐Seq S Jaini, A Lyubetskaya, A Gomes, M Peterson, ST Park, S Raman, ... Molecular Genetics of Mycobacteria, 161-181, 2014 | 28 | 2014 |
| MAIT and Vδ2 unconventional T cells are supported by a diverse intestinal microbiome and correlate with favorable patient outcome after allogeneic HCT H Andrlová, O Miltiadous, AI Kousa, A Dai, S DeWolf, S Violante, HY Park, ... Science translational medicine 14 (646), eabj2829, 2022 | 24 | 2022 |
| Conditioning regimens are associated with distinct patterns of microbiota injury in allogeneic hematopoietic cell transplantation R Shouval, NR Waters, ALC Gomes, C Zuanelli Brambilla, T Fei, ... Clinical Cancer Research 29 (1), 165-173, 2023 | 23 | 2023 |
Jonathan U. PeledAssistant Member, Memorial Sloan Kettering Cancer CenterVerified email at mskcc.org
