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Thawfeek Varusai
Thawfeek Varusai
Scientific data analyst, EMBL-EBI
Adresse e-mail validée de ebi.ac.uk - Page d'accueil
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The reactome pathway knowledgebase
A Fabregat, S Jupe, L Matthews, K Sidiropoulos, M Gillespie, P Garapati, ...
Nucleic acids research 46 (D1), D649-D655, 2018
33422018
The reactome pathway knowledgebase
B Jassal, L Matthews, G Viteri, C Gong, P Lorente, A Fabregat, ...
Nucleic acids research 48 (D1), D498-D503, 2020
26392020
The reactome pathway knowledgebase 2022
M Gillespie, B Jassal, R Stephan, M Milacic, K Rothfels, A Senff-Ribeiro, ...
Nucleic acids research 50 (D1), D687-D692, 2022
13732022
BioModels—15 years of sharing computational models in life science
RS Malik-Sheriff, M Glont, TVN Nguyen, K Tiwari, MG Roberts, A Xavier, ...
Nucleic acids research 48 (D1), D407-D415, 2020
3302020
The reactome pathway knowledgebase 2024
M Milacic, D Beavers, P Conley, C Gong, M Gillespie, J Griss, R Haw, ...
Nucleic acids research 52 (D1), D672-D678, 2024
1252024
COVID19 Disease Map, a computational knowledge repository of virus–host interaction mechanisms
M Ostaszewski, A Niarakis, A Mazein, I Kuperstein, R Phair, ...
Molecular systems biology 17 (10), e10387, 2021
872021
Toward community standards and software for whole-cell modeling
D Waltemath, JR Karr, FT Bergmann, V Chelliah, M Hucka, M Krantz, ...
IEEE Transactions on Biomedical Engineering 63 (10), 2007-2014, 2016
642016
The impact of mathematical modeling in understanding the mechanisms underlying neurodegeneration: evolving dimensions and future directions
A Lloret‐Villas, TM Varusai, N Juty, C Laibe, N Le Novere, H Hermjakob, ...
CPT: pharmacometrics & systems pharmacology 6 (2), 73-86, 2017
522017
Dynamic modelling of the mTOR signalling network reveals complex emergent behaviours conferred by DEPTOR
TM Varusai, LK Nguyen
Scientific reports 8 (1), 643, 2018
342018
Protein–protein interactions generate hidden feedback and feed-forward loops to trigger bistable switches, oscillations and biphasic dose–responses
TM Varusai, W Kolch, BN Kholodenko, LK Nguyen
Molecular BioSystems 11 (10), 2750-2762, 2015
342015
Interleukins and their signaling pathways in the Reactome biological pathway database
S Jupe, K Ray, CD Roca, T Varusai, V Shamovsky, L Stein, P D'Eustachio, ...
Journal of Allergy and Clinical Immunology 141 (4), 1411-1416, 2018
152018
Reactome and ORCID—fine-grained credit attribution for community curation
G Viteri, L Matthews, T Varusai, M Gillespie, M Milacic, J Cook, J Weiser, ...
Database 2019, baz123, 2019
132019
Ubiquitin chain specific auto‐ubiquitination triggers sustained oscillation, bistable switches and excitable firing
LK Nguyen, Q Zhao, TM Varusai, BN Kholodenko
IET systems biology 8 (6), 282-292, 2014
112014
Using Reactome to build an autophagy mechanism knowledgebase
TM Varusai, S Jupe, C Sevilla, L Matthews, M Gillespie, L Stein, G Wu, ...
Autophagy 17 (6), 1543-1554, 2021
82021
Autophagy Targeted Curation
T Varusai, C Sevilla, L Matthews, M Gillespie, L Stein, G Wu, ...
F1000Research 8, 2019
2019
Protein-protein interactions generate hidden feedback and feed-forward loops to trigger bistable
TM Varusai, W Kolch, BN Kholodenko, LK Nguyen
Varusai, Thawfeek M., Walter Kolch, Boris N. Kholodenko, and Lan K. Nguyen …, 2015
2015
p-STAT4 dissociates from IL12RB2: IL12RB2 receptor
Y Pylayeva-Gupta, K Singh, TM Varusai
Active MTORC1 phosphorylates ULK1
S Jupe, DJ Klionsky, SA Tooze, TM Varusai
Unfolded substrate in LAMP2a multimeric complex binds HSPA8
E Metzakopian, TM Varusai
LC3 is cleaved by ATG4
S Jupe, DJ Klionsky, SA Tooze, TM Varusai
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