Artigos com autorizações de acesso público - Gail RosenSaiba mais
1 artigo não disponível publicamente
Incremental author name disambiguation for scientific citation data
Z Zhao, J Rollins, L Bai, G Rosen
2017 IEEE international conference on data science and advanced analytics …, 2017
Autorizações: US National Science Foundation
46 artigos disponíveis publicamente
Opportunities and obstacles for deep learning in biology and medicine
T Ching, DS Himmelstein, BK Beaulieu-Jones, AA Kalinin, BT Do, ...
Journal of the royal society interface 15 (141), 20170387, 2018
Autorizações: US National Science Foundation, US National Institutes of Health, Howard …
Environmental and ecological factors that shape the gut bacterial communities of fish: a meta‐analysis
KE Sullam, SD Essinger, CA Lozupone, MP O’CONNOR, GL Rosen, ...
Molecular ecology 21 (13), 3363-3378, 2012
Autorizações: Howard Hughes Medical Institute
Comprehensive benchmarking and ensemble approaches for metagenomic classifiers
ABR McIntyre, R Ounit, E Afshinnekoo, RJ Prill, E Hénaff, N Alexander, ...
Genome biology 18, 1-19, 2017
Autorizações: US National Science Foundation, Bill & Melinda Gates Foundation, US National …
Critical assessment of metagenome interpretation: the second round of challenges
F Meyer, A Fritz, ZL Deng, D Koslicki, TR Lesker, A Gurevich, G Robertson, ...
Nature methods 19 (4), 429-440, 2022
Autorizações: US National Science Foundation, US Department of Energy, Swiss National …
Emerging priorities for microbiome research
CM Cullen, KK Aneja, S Beyhan, CE Cho, S Woloszynek, M Convertino, ...
Frontiers in microbiology 11, 491374, 2020
Autorizações: US National Science Foundation, US Department of Defense, US National …
Multi-layer and recursive neural networks for metagenomic classification
G Ditzler, R Polikar, G Rosen
IEEE transactions on nanobioscience 14 (6), 608-616, 2015
Autorizações: US Department of Energy
Prokaryotic nucleotide composition is shaped by both phylogeny and the environment
ER Reichenberger, G Rosen, U Hershberg, R Hershberg
Genome biology and evolution 7 (5), 1380-1389, 2015
Autorizações: US Department of Energy, Ford Foundation, US National Institutes of Health …
Marker genes that are less conserved in their sequences are useful for predicting genome-wide similarity levels between closely related prokaryotic strains
Y Lan, G Rosen, R Hershberg
Microbiome 4, 1-13, 2016
Autorizações: US National Science Foundation, US Department of Energy, European Commission
Nanopore sequencing in microgravity
ABR McIntyre, L Rizzardi, AM Yu, N Alexander, GL Rosen, DJ Botkin, ...
npj Microgravity 2 (1), 1-9, 2016
Autorizações: Bill & Melinda Gates Foundation, US National Institutes of Health, US …
Genetic grouping of SARS-CoV-2 coronavirus sequences using informative subtype markers for pandemic spread visualization
Z Zhao, BA Sokhansanj, C Malhotra, K Zheng, GL Rosen
PLoS computational biology 16 (9), e1008269, 2020
Autorizações: US National Science Foundation
Fizzy: feature subset selection for metagenomics
G Ditzler, JC Morrison, Y Lan, GL Rosen
BMC bioinformatics 16, 1-8, 2015
Autorizações: US Department of Energy
Metagenomic characterization of ambulances across the USA
NB O’Hara, HJ Reed, E Afshinnekoo, D Harvin, N Caplan, G Rosen, ...
Microbiome 5, 1-20, 2017
Autorizações: US National Science Foundation, Bill & Melinda Gates Foundation, US National …
Extensions to online feature selection using bagging and boosting
G Ditzler, J LaBarck, J Ritchie, G Rosen, R Polikar
IEEE transactions on neural networks and learning systems 29 (9), 4504-4509, 2017
Autorizações: US National Science Foundation
Amino Acid k-mer Feature Extraction for Quantitative Antimicrobial Resistance (AMR) Prediction by Machine Learning and Model Interpretation for Biological Insights
T ValizadehAslani, Z Zhao, BA Sokhansanj, GL Rosen
Biology 9 (11), 365, 2020
Autorizações: US National Science Foundation
A sequential learning approach for scaling up filter-based feature subset selection
G Ditzler, R Polikar, G Rosen
IEEE Transactions on Neural Networks and Learning Systems 29 (6), 2530-2544, 2017
Autorizações: US National Science Foundation
POGO-DB—a database of pairwise-comparisons of genomes and conserved orthologous genes
Y Lan, JC Morrison, R Hershberg, GL Rosen
Nucleic acids research 42 (D1), D625-D632, 2014
Autorizações: European Commission
Keeping up with the genomes: efficient learning of our increasing knowledge of the tree of life
Z Zhao, A Cristian, G Rosen
BMC bioinformatics 21, 1-23, 2020
Autorizações: US National Science Foundation
Learning, visualizing and exploring 16S rRNA structure using an attention-based deep neural network
Z Zhao, S Woloszynek, F Agbavor, JC Mell, BA Sokhansanj, GL Rosen
PLoS computational biology 17 (9), e1009345, 2021
Autorizações: US National Science Foundation
Exploring thematic structure and predicted functionality of 16S rRNA amplicon data
S Woloszynek, JC Mell, Z Zhao, G Simpson, MP O’Connor, GL Rosen
PLoS One 14 (12), e0219235, 2019
Autorizações: US National Science Foundation
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