Deep learning and its applications in biomedicine C Cao, F Liu, H Tan, D Song, W Shu, W Li, Y Zhou, X Bo, Z Xie Genomics, proteomics and bioinformatics 16 (1), 17-32, 2018 | 666 | 2018 |
Profiling the human protein-DNA interactome reveals ERK2 as a transcriptional repressor of interferon signaling S Hu, Z Xie, A Onishi, X Yu, L Jiang, J Lin, H Rho, C Woodard Cell 139 (3), 610-622, 2009 | 455 | 2009 |
Global analyses of human immune variation reveal baseline predictors of postvaccination responses JS Tsang, PL Schwartzberg, Y Kotliarov, A Biancotto, Z Xie, RN Germain, ... Cell 157 (2), 499-513, 2014 | 430 | 2014 |
MECAT: fast mapping, error correction, and de novo assembly for single-molecule sequencing reads CL Xiao, Y Chen, SQ Xie, KN Chen, Y Wang, Y Han, F Luo, Z Xie nature methods 14 (11), 1072-1074, 2017 | 360 | 2017 |
A nuclease that mediates cell death induced by DNA damage and poly (ADP-ribose) polymerase-1 Y Wang, R An, GK Umanah, H Park, K Nambiar, SM Eacker, BW Kim, ... Science 354 (6308), aad6872, 2016 | 346 | 2016 |
Construction of human activity-based phosphorylation networks RH Newman, J Hu, HS Rho, Z Xie, C Woodard, J Neiswinger, C Cooper, ... Molecular Systems Biology 9 (1), 2013 | 190 | 2013 |
Regulation of CK2 by phosphorylation and O-GlcNA cylation revealed by semisynthesis MK Tarrant, HS Rho, Z Xie, YL Jiang, C Gross, JC Culhane, G Yan, J Qian, ... Nature Chemcial Biology 8, 262-269, 2012 | 175 | 2012 |
Conserved herpesvirus kinases target the DNA damage response pathway and TIP60 histone acetyltransferase to promote virus replication R Li, J Zhu, Z Xie, G Liao, J Liu, MR Chen, S Hu, C Woodard, J Lin, ... Cell host & microbe 10 (4), 390-400, 2011 | 174 | 2011 |
Ultra-low dose interleukin-2 promotes immune-modulating function of regulatory T cells and natural killer cells in healthy volunteers S Ito, CM Bollard, M Carlsten, JJ Melenhorst, A Biancotto, E Wang, J Chen, ... Molecular therapy 22 (7), 1388-1395, 2014 | 135 | 2014 |
MethSMRT: an integrative database for DNA N6-methyladenine and N4-methylcytosine generated by single-molecular real-time sequencing P Ye, Y Luan, K Chen, Y Liu, C Xiao, Z Xie Nucleic acids research, gkw950, 2016 | 130 | 2016 |
The metagenomics and metadesign of the subways and urban biomes (MetaSUB) international consortium inaugural meeting report Microbiome 4 (1), 24, 2016 | 124 | 2016 |
iPSCs from a hibernator provide a platform for studying cold adaptation and its potential medical applications J Ou, JM Ball, Y Luan, T Zhao, KJ Miyagishima, Y Xu, H Zhou, J Chen, ... Cell 173 (4), 851-863. e16, 2018 | 118 | 2018 |
The anti-Warburg effect elicited by the cAMP-PGC1α pathway drives differentiation of glioblastoma cells into astrocytes F Xing, Y Luan, J Cai, S Wu, J Mai, J Gu, H Zhang, K Li, Y Lin, X Xiao, ... Cell reports 18 (2), 468-481, 2017 | 112 | 2017 |
Functional protein microarray technology S Hu, Z Xie, J Qian, S Blackshaw, H Zhu Wiley Interdisciplinary Reviews: Systems Biology and Medicine 3 (3), 255-268, 2011 | 102 | 2011 |
hPDI: a database of experimental human protein–DNA interactions Z Xie, S Hu, S Blackshaw, H Zhu, J Qian Bioinformatics 26 (2), 287-289, 2010 | 82 | 2010 |
Deciphering poxvirus gene expression by RNA sequencing and ribosome profiling Z Yang, S Cao, CA Martens, SF Porcella, Z Xie, M Ma, B Shen, B Moss Journal of virology 89 (13), 6874-6886, 2015 | 81 | 2015 |
Remodeling of the immune and stromal cell compartment by PD-1 blockade in mismatch repair-deficient colorectal cancer J Li, C Wu, H Hu, G Qin, X Wu, F Bai, J Zhang, Y Cai, Y Huang, C Wang, ... Cancer Cell 41 (6), 1152-1169. e7, 2023 | 73 | 2023 |
Enhancer-driven lncRNA BDNF-AS induces endocrine resistance and malignant progression of breast cancer through the RNH1/TRIM21/mTOR cascade X Lin, X Dinglin, S Cao, S Zheng, C Wu, W Chen, Q Li, Q Hu, F Zheng, ... Cell reports 31 (10), 2020 | 66 | 2020 |
Baylor HIPC Center; CHI Consortium (2014). Global analyses of human immune variation reveal baseline predictors of postvaccination responses JS Tsang, PL Schwartzberg, Y Kotliarov, A Biancotto, Z Xie, RN Germain, ... Cell 157 (2), 499-513, 0 | 66 | |
Protein microarray characterization of the S-nitrosoproteome YI Lee, D Giovinazzo, HC Kang, Y Lee, JS Jeong, PT Doulias, Z Xie, J Hu, ... Molecular & Cellular Proteomics 13 (1), 63-72, 2014 | 65 | 2014 |