| Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1 DJ Klionsky, AK Abdel-Aziz, S Abdelfatah, M Abdellatif, A Abdoli, S Abel, ... autophagy 17 (1), 1-382, 2021 | 10910 | 2021 |
| Rule-based modeling of biochemical systems with BioNetGen JR Faeder, ML Blinov, WS Hlavacek Methods Mol Biol 500, 113-167, 2009 | 547 | 2009 |
| BioNetGen: software for rule-based modeling of signal transduction based on the interactions of molecular domains ML Blinov, JR Faeder, B Goldstein, WS Hlavacek Bioinformatics 20 (17), 3289-3291, 2004 | 523 | 2004 |
| Rules for modeling signal-transduction systems WS Hlavacek, JR Faeder, ML Blinov, RG Posner, M Hucka, W Fontana Science's STKE 2006 (344), re6-re6, 2006 | 459 | 2006 |
| Design of gene circuits: lessons from bacteria ME Wall, WS Hlavacek, MA Savageau Nature Reviews Genetics 5 (1), 34-42, 2004 | 276 | 2004 |
| The complexity of complexes in signal transduction WS Hlavacek, JR Faeder, ML Blinov, AS Perelson, B Goldstein Biotechnology and bioengineering 84 (7), 783-794, 2003 | 261 | 2003 |
| Mathematical and computational models of immune-receptor signalling B Goldstein, JR Faeder, WS Hlavacek Nature Reviews Immunology 4 (6), 445-456, 2004 | 258 | 2004 |
| SBML Level 3: an extensible format for the exchange and reuse of biological models SM Keating, D Waltemath, M König, F Zhang, A Dräger, C Chaouiya, ... Molecular systems biology 16 (8), e9110, 2020 | 225 | 2020 |
| Investigation of early events in FcεRI-mediated signaling using a detailed mathematical model JR Faeder, WS Hlavacek, I Reischl, ML Blinov, H Metzger, A Redondo, ... The Journal of Immunology 170 (7), 3769-3781, 2003 | 221 | 2003 |
| A network model of early events in epidermal growth factor receptor signaling that accounts for combinatorial complexity ML Blinov, JR Faeder, B Goldstein, WS Hlavacek Biosystems 83 (2-3), 136-151, 2006 | 207 | 2006 |
| Rule‐based modeling of biochemical networks JR Faeder, ML Blinov, B Goldstein, WS Hlavacek Complexity 10 (4), 22-41, 2005 | 178 | 2005 |
| Steric effects on multivalent ligand-receptor binding: exclusion of ligand sites by bound cell surface receptors WS Hlavacek, RG Posner, AS Perelson Biophysical journal 76 (6), 3031-3043, 1999 | 163 | 1999 |
| Rule‐based modeling: a computational approach for studying biomolecular site dynamics in cell signaling systems LA Chylek, LA Harris, CS Tung, JR Faeder, CF Lopez, WS Hlavacek Wiley Interdisciplinary Reviews: Systems Biology and Medicine 6 (1), 13-36, 2014 | 161 | 2014 |
| Kinetic Monte Carlo method for rule-based modeling of biochemical networks J Yang, MI Monine, JR Faeder, WS Hlavacek Physical Review E—Statistical, Nonlinear, and Soft Matter Physics 78 (3 …, 2008 | 155 | 2008 |
| Rules for coupled expression of regulator and effector genes in inducible circuits WS Hlavacek, MA Savageau Journal of molecular biology 255 (1), 121-139, 1996 | 148 | 1996 |
| Mitochondrial morphological features are associated with fission and fusion events LM Westrate, JA Drocco, KR Martin, WS Hlavacek, JP MacKeigan PloS one 9 (4), e95265, 2014 | 129 | 2014 |
| Graph theory for rule-based modeling of biochemical networks ML Blinov, J Yang, JR Faeder, WS Hlavacek Lect Notes Comput Sci 4230, 89-106, 2006 | 114 | 2006 |
| Stochastic effects and bistability in T cell receptor signaling T Lipniacki, B Hat, JR Faeder, WS Hlavacek Journal of theoretical Biology 254 (1), 110-122, 2008 | 103 | 2008 |
| Multiple functions of a feed-forward-loop gene circuit ME Wall, MJ Dunlop, WS Hlavacek Journal of molecular biology 349 (3), 501-514, 2005 | 100 | 2005 |
| The united states covid-19 forecast hub dataset EY Cramer, Y Huang, Y Wang, EL Ray, M Cornell, J Bracher, A Brennen, ... Scientific data 9 (1), 462, 2022 | 95 | 2022 |
James R FaederUniversity of Pittsburgh在 pitt.edu 的电子邮件经过验证